RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 C16orf87Q6PH81 154 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 ZNF818PQ6ZRF7 136 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 TGIF2LXQ8IUE1 241 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 DRAM1Q8N682 238 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 DRAXINQ8NBI3 349 aaPredicted RBP12.69□□□□□ -0.38
DDX55-203ENST00000421670 OR13C8Q8NGS7 320 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 TERB2Q8NHR7 220 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 FAM216AQ8WUB2 273 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 BORCS5Q969J3 196 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 RBMXL1Q96E39 390 aaKnown RBP12.69□□□□□ -0.38
DDX55-203ENST00000421670 MALSU1Q96EH3 234 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 ZNF48Q96MX3 618 aaPredicted RBP12.69□□□□□ -0.38
DDX55-203ENST00000421670 GPHA2Q96T91 129 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 S1PR3Q99500 378 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 MRPL20Q9BYC9 149 aaKnown RBP12.69□□□□□ -0.38
DDX55-203ENST00000421670 SCP2D1Q9UJQ7 156 aa12.69□□□□□ -0.38
DDX55-203ENST00000421670 A0A1W2PPI3 338 aa12.68□□□□□ -0.38
DDX55-203ENST00000421670 CENPXA8MT69 81 aa12.68□□□□□ -0.38
DDX55-203ENST00000421670 LYRM1O43325 122 aa12.68□□□□□ -0.38
DDX55-203ENST00000421670 LINC00205P59089 165 aa12.68□□□□□ -0.38
DDX55-203ENST00000421670 MARCH1Q8TCQ1 289 aa12.68□□□□□ -0.38
DDX55-203ENST00000421670 C7orf50Q9BRJ6 194 aaKnown RBP12.68□□□□□ -0.38
DDX55-203ENST00000421670 IGHV1-3A0A0C4DH29 117 aa12.67□□□□□ -0.38
DDX55-203ENST00000421670 M0R1X1 148 aa12.67□□□□□ -0.38
DDX55-203ENST00000421670 TNFSF12O43508 249 aa12.67□□□□□ -0.38
DDX55-203ENST00000421670 GAPDHP04406 335 aaKnown RBP12.67□□□□□ -0.38
DDX55-203ENST00000421670 PGAM2P15259 253 aa12.67□□□□□ -0.38
DDX55-203ENST00000421670 PI3P19957 117 aa12.67□□□□□ -0.38
DDX55-203ENST00000421670 GNRHRP30968 328 aa12.67□□□□□ -0.38
DDX55-203ENST00000421670 ZNF816Q0VGE8 651 aaPredicted RBP12.67□□□□□ -0.38
DDX55-203ENST00000421670 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.67□□□□□ -0.38
DDX55-203ENST00000421670 GHITMQ9H3K2 345 aa12.67□□□□□ -0.38
DDX55-203ENST00000421670 IGHV3-72A0A0B4J1Y9 119 aa12.66□□□□□ -0.38
DDX55-203ENST00000421670 NAP1L6A6NFF2 107 aa12.66□□□□□ -0.38
DDX55-203ENST00000421670 TIMM23O14925 209 aa12.66□□□□□ -0.38
DDX55-203ENST00000421670 CRLF1O75462 422 aa12.66□□□□□ -0.38
DDX55-203ENST00000421670 ASAH1Q13510 395 aa12.66□□□□□ -0.38
DDX55-203ENST00000421670 PHLDA2Q53GA4 152 aa12.66□□□□□ -0.38
DDX55-203ENST00000421670 FAM71F2Q6NXP2 309 aa12.66□□□□□ -0.38
DDX55-203ENST00000421670 GLDNQ6ZMI3 551 aaPredicted RBP12.66□□□□□ -0.38
DDX55-203ENST00000421670 TXNL1O43396 289 aa12.65□□□□□ -0.38
DDX55-203ENST00000421670 SLC22A5O76082 557 aa12.65□□□□□ -0.38
DDX55-203ENST00000421670 CT45A6P0DMU7 189 aa12.65□□□□□ -0.38
DDX55-203ENST00000421670 CT45A5P0DMU8 189 aa12.65□□□□□ -0.38
DDX55-203ENST00000421670 CT45A7P0DMV0 189 aa12.65□□□□□ -0.38
DDX55-203ENST00000421670 CD24P25063 80 aa12.65□□□□□ -0.38
DDX55-203ENST00000421670 RAB13P51153 203 aa12.65□□□□□ -0.38
DDX55-203ENST00000421670 UCP3P55916 312 aa12.65□□□□□ -0.38
DDX55-203ENST00000421670 CCDC144NLQ6NUI1 221 aa12.65□□□□□ -0.38
DDX55-203ENST00000421670 MOB3BQ86TA1 216 aa12.65□□□□□ -0.38
DDX55-203ENST00000421670 SLC38A6Q8IZM9 456 aa12.65□□□□□ -0.38
DDX55-203ENST00000421670 SIGLECL1Q8N7X8 197 aa12.65□□□□□ -0.38
DDX55-203ENST00000421670 NABP2Q9BQ15 211 aa12.65□□□□□ -0.38
DDX55-203ENST00000421670 RSRP1Q9BUV0 290 aa12.65□□□□□ -0.38
DDX55-203ENST00000421670 LINC00473A8K010 186 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 OOSP1A8MZH6 123 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 EIF4EBP1Q13541 118 aaPredicted RBP12.64□□□□□ -0.39
DDX55-203ENST00000421670 FBLN7Q53RD9 439 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 OR8H3Q8N146 312 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 BVESQ8NE79 360 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 CFHR4Q92496 578 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 ZDHHC16Q969W1 377 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 MEGF9Q9H1U4 602 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 OCEL1Q9H607 264 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 GAB2Q9UQC2 676 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 VSIG4Q9Y279 399 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 GPR31O00270 319 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 RLN1P04808 185 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 FAM157CP0CG43 387 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 DUTP33316 252 aaKnown RBP12.64□□□□□ -0.39
DDX55-203ENST00000421670 ECI1P42126 302 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 RPL30P62888 115 aaKnown RBP12.64□□□□□ -0.39
DDX55-203ENST00000421670 SCGB2A2Q13296 93 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 RBMS2Q15434 407 aaKnown RBP12.64□□□□□ -0.39
DDX55-203ENST00000421670 MSMO1Q15800 293 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 TUSC1Q2TAM9 212 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 LRRC75BQ2VPJ9 315 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 OR2B11Q5JQS5 317 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 LPCAT3Q6P1A2 487 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 KCTD9Q7L273 389 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 ZNF383Q8NA42 475 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 POC5Q8NA72 575 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 SSX3Q99909 188 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 C5orf66Q9H5L9 145 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 SLC2A9Q9NRM0 540 aa12.64□□□□□ -0.39
DDX55-203ENST00000421670 H3BUX3 64 aa12.63□□□□□ -0.39
DDX55-203ENST00000421670 IGHV4-59P01825 116 aa12.63□□□□□ -0.39
DDX55-203ENST00000421670 ARHGDIBP52566 201 aa12.63□□□□□ -0.39
DDX55-203ENST00000421670 ABCA11PQ4W5N1 156 aa12.63□□□□□ -0.39
DDX55-203ENST00000421670 CMTM1Q8IZ96 169 aa12.63□□□□□ -0.39
DDX55-203ENST00000421670 OR51H1Q8NH63 302 aa12.63□□□□□ -0.39
DDX55-203ENST00000421670 AKR1E2Q96JD6 320 aa12.63□□□□□ -0.39
DDX55-203ENST00000421670 GPR132Q9UNW8 380 aa12.63□□□□□ -0.39
DDX55-203ENST00000421670 VGLL3A8MV65 326 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 H0YJW9 148 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 HOXA3O43365 443 aaPredicted RBP12.62□□□□□ -0.39
DDX55-203ENST00000421670 NDUFB6O95139 128 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 CTSDP07339 412 aaPredicted RBP12.62□□□□□ -0.39
DDX55-203ENST00000421670 SLC6A1P30531 599 aa12.62□□□□□ -0.39
DDX55-203ENST00000421670 THBS3P49746 956 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms