RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 RAB4AP20338 218 aa17.96■□□□□ 0.47
USP48-205ENST00000421625 KCNIP4Q6PIL6 250 aa17.96■□□□□ 0.47
USP48-205ENST00000421625 GUCD1Q96NT3 240 aa17.96■□□□□ 0.47
USP48-205ENST00000421625 LIN7CQ9NUP9 197 aaKnown RBP17.96■□□□□ 0.47
USP48-205ENST00000421625 SIT1Q9Y3P8 196 aa17.96■□□□□ 0.47
USP48-205ENST00000421625 DOCK11Q5JSL3 2073 aa17.96■□□□□ 0.47
USP48-205ENST00000421625 A0A0U1RQK1 487 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 ZNF320A2RRD8 509 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 ZNF503-AS2A6NEH8 195 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 K7ESF4 209 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 DEGS1O15121 323 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 SRD5A2P31213 254 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 ARF1P84077 181 aaKnown RBP17.95■□□□□ 0.46
USP48-205ENST00000421625 CLN8Q9UBY8 286 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 TRAPPC1Q9Y5R8 145 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 TMEM210A6NLX4 147 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 TRAPPC6AO75865 159 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 CRYAAP02489 173 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 GCH1P30793 250 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 MPLP40238 635 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 RPL29P47914 159 aaKnown RBP17.95■□□□□ 0.46
USP48-205ENST00000421625 FOXG1P55316 489 aaPredicted RBP17.95■□□□□ 0.46
USP48-205ENST00000421625 PCED1AQ9H1Q7 454 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 ESPL1Q14674 2120 aa17.95■□□□□ 0.46
USP48-205ENST00000421625 RHBDL1O75783 438 aa17.94■□□□□ 0.46
USP48-205ENST00000421625 PDGFBP01127 241 aaPredicted RBP17.94■□□□□ 0.46
USP48-205ENST00000421625 CD33P20138 364 aa17.94■□□□□ 0.46
USP48-205ENST00000421625 FAM58AQ8N1B3 248 aa17.94■□□□□ 0.46
USP48-205ENST00000421625 LY6G6EA0A0G2JKS1 128 aa17.94■□□□□ 0.46
USP48-205ENST00000421625 PCP4P48539 62 aa17.94■□□□□ 0.46
USP48-205ENST00000421625 KCNE4Q8WWG9 221 aa17.94■□□□□ 0.46
USP48-205ENST00000421625 U3KQA8 63 aa17.94■□□□□ 0.46
USP48-205ENST00000421625 TNRC6AQ8NDV7 1962 aaKnown RBP17.94■□□□□ 0.46
USP48-205ENST00000421625 LRP5LA4QPB2 252 aa17.94■□□□□ 0.46
USP48-205ENST00000421625 C11orf94C9JXX5 98 aa17.94■□□□□ 0.46
USP48-205ENST00000421625 VENTXO95231 258 aa17.94■□□□□ 0.46
USP48-205ENST00000421625 MLF1P58340 268 aa17.94■□□□□ 0.46
USP48-205ENST00000421625 CST9LP1Q5W188 147 aa17.94■□□□□ 0.46
USP48-205ENST00000421625 DRAM1Q8N682 238 aa17.94■□□□□ 0.46
USP48-205ENST00000421625 OR5A2Q8NGI9 324 aa17.94■□□□□ 0.46
USP48-205ENST00000421625 PGPEP1LA6NFU8 196 aa17.93■□□□□ 0.46
USP48-205ENST00000421625 A6NNC1 897 aa17.93■□□□□ 0.46
USP48-205ENST00000421625 ZNF705FA8MVS1 300 aaPredicted RBP17.93■□□□□ 0.46
USP48-205ENST00000421625 MLNRO43193 412 aa17.93■□□□□ 0.46
USP48-205ENST00000421625 ZNF705DP0CH99 300 aaPredicted RBP17.93■□□□□ 0.46
USP48-205ENST00000421625 ZNF705BP0CI00 300 aaPredicted RBP17.93■□□□□ 0.46
USP48-205ENST00000421625 RELQ04864 619 aaPredicted RBP17.93■□□□□ 0.46
USP48-205ENST00000421625 TCF23Q7RTU1 214 aa17.93■□□□□ 0.46
USP48-205ENST00000421625 LINC01551Q86U37 167 aa17.93■□□□□ 0.46
USP48-205ENST00000421625 MS4A10Q96PG2 267 aa17.93■□□□□ 0.46
USP48-205ENST00000421625 DERL1Q9BUN8 251 aa17.93■□□□□ 0.46
USP48-205ENST00000421625 WDR54Q9H977 334 aa17.93■□□□□ 0.46
USP48-205ENST00000421625 RAMP3O60896 148 aa17.93■□□□□ 0.46
USP48-205ENST00000421625 PPP1CBP62140 327 aa17.93■□□□□ 0.46
USP48-205ENST00000421625 LCN2P80188 198 aa17.93■□□□□ 0.46
USP48-205ENST00000421625 OR1L1Q8NH94 360 aa17.93■□□□□ 0.46
USP48-205ENST00000421625 TMEM147Q9BVK8 224 aa17.93■□□□□ 0.46
USP48-205ENST00000421625 KLF7O75840 302 aaPredicted RBP17.92■□□□□ 0.46
USP48-205ENST00000421625 C1QTNF9P0C862 333 aa17.92■□□□□ 0.46
USP48-205ENST00000421625 SDSLQ96GA7 329 aa17.92■□□□□ 0.46
USP48-205ENST00000421625 TBX15Q96SF7 602 aa17.92■□□□□ 0.46
USP48-205ENST00000421625 IL17BQ9UHF5 180 aa17.92■□□□□ 0.46
USP48-205ENST00000421625 PXMP4Q9Y6I8 212 aa17.92■□□□□ 0.46
USP48-205ENST00000421625 NPIPB11E5RHQ5 1161 aa17.92■□□□□ 0.46
USP48-205ENST00000421625 G6PCP35575 357 aa17.92■□□□□ 0.46
USP48-205ENST00000421625 UBE2G2P60604 165 aa17.92■□□□□ 0.46
USP48-205ENST00000421625 ZNF705AQ6ZN79 300 aaPredicted RBP17.92■□□□□ 0.46
USP48-205ENST00000421625 LINC00596Q86U02 117 aa17.92■□□□□ 0.46
USP48-205ENST00000421625 NPCDR1Q9BY65 106 aa17.92■□□□□ 0.46
USP48-205ENST00000421625 OR51B6Q9H340 312 aa17.92■□□□□ 0.46
USP48-205ENST00000421625 R4GN57 208 aa17.92■□□□□ 0.46
USP48-205ENST00000421625 SIRPB1O00241 398 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 KRASP01116 189 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 COX5AP20674 150 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 OR10J1P30954 320 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 GNB1P62873 340 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 TMEM144Q7Z5S9 345 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 ZNF114Q8NC26 417 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 WDYHV1Q96HA8 205 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 FRYQ5TBA9 3013 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 NCOR1O75376 2440 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 PMS2P5A8MQ11 134 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 FAM90A26D6RGX4 464 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 MBP02144 154 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 ATP5G3P48201 142 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 DEFB123Q8N688 67 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 ZDHHC16Q969W1 377 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 APOBEC3DQ96AK3 386 aaPredicted RBP17.91■□□□□ 0.46
USP48-205ENST00000421625 HSPB7Q9UBY9 170 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 TRAPPC2LQ9UL33 140 aa17.91■□□□□ 0.46
USP48-205ENST00000421625 P04436 131 aa17.9■□□□□ 0.46
USP48-205ENST00000421625 AGBL5Q8NDL9 886 aa17.9■□□□□ 0.46
USP48-205ENST00000421625 GRIFINA4D1Z8 144 aa17.9■□□□□ 0.46
USP48-205ENST00000421625 TDRG1Q3Y452 100 aa17.9■□□□□ 0.46
USP48-205ENST00000421625 SPINK9Q5DT21 86 aa17.9■□□□□ 0.46
USP48-205ENST00000421625 Q6P435 159 aa17.9■□□□□ 0.46
USP48-205ENST00000421625 R3HDM4Q96D70 268 aa17.9■□□□□ 0.46
USP48-205ENST00000421625 ZG16O60844 167 aa17.9■□□□□ 0.46
USP48-205ENST00000421625 MRPL33O75394 65 aaKnown RBP17.9■□□□□ 0.46
USP48-205ENST00000421625 HPRT1P00492 218 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms