RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 SRSF6Q13247 344 aaKnown RBP9.17□□□□□ -0.94
PTCH1-206ENST00000421141 TOR2AQ5JU69 321 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 WFDC3Q8IUB2 231 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 STPG3Q8N7X2 389 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 WFIKKN1Q96NZ8 548 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 DUXBA0A1W2PPF3 345 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 ZNF716A6NP11 495 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 BMPR1BO00238 502 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 EXOSC2Q13868 293 aaKnown RBP9.17□□□□□ -0.94
PTCH1-206ENST00000421141 ZIC4Q8N9L1 334 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 ZNRF1Q8ND25 227 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 SMIM7Q9BQ49 75 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 ELOVL1Q9BW60 279 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 AKIP1Q9NQ31 210 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 U3KQ87 197 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 ARFGEF3Q5TH69 2177 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 BCL2L11O43521 198 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 RPS10P46783 165 aaKnown RBP9.17□□□□□ -0.94
PTCH1-206ENST00000421141 Q0VFX4 171 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 PJVKQ0ZLH3 352 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 C10orf113Q5VZT2 155 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 STXBP6Q8NFX7 210 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 PLSCR4Q9NRQ2 329 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 TMEM167BQ9NRX6 74 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 GCM2O75603 506 aaPredicted RBP9.17□□□□□ -0.94
PTCH1-206ENST00000421141 V9GYS6 101 aa9.17□□□□□ -0.94
PTCH1-206ENST00000421141 FOXF2Q12947 444 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 NPFFR1Q9GZQ6 430 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 TECRQ9NZ01 308 aaKnown RBP9.16□□□□□ -0.94
PTCH1-206ENST00000421141 CUL9Q8IWT3 2517 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 GNG4P50150 75 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 RELQ04864 619 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-206ENST00000421141 RRN3P1Q2M238 152 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 TEPPQ6URK8 271 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 LILRB4Q8NHJ6 448 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 BAP18Q8IXM2 172 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 RBM14Q96PK6 669 aaKnown RBP9.16□□□□□ -0.94
PTCH1-206ENST00000421141 SAV1Q9H4B6 383 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-206ENST00000421141 SRCAPQ6ZRS2 3230 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 H0Y8G0 127 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 ADRB1P08588 477 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 CDC34P49427 236 aaPredicted RBP9.16□□□□□ -0.94
PTCH1-206ENST00000421141 H0Y980 276 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 SCTP09683 121 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 PSG7Q13046 419 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 UBE2V2Q15819 145 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 IGSF11Q5DX21 431 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 OR4X2Q8NGF9 303 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 OR5M8Q8NGP6 311 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 EEF1AKMT3Q96AZ1 226 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 PPOXP50336 477 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 OR4X1Q8NH49 305 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 SSMEM1Q8WWF3 244 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 C16orf92Q96LL3 132 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 ZDHHC11Q9H8X9 412 aa9.16□□□□□ -0.94
PTCH1-206ENST00000421141 OR2A4O95047 310 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 UBE2L3P68036 154 aaKnown RBP9.15□□□□□ -0.94
PTCH1-206ENST00000421141 PAX5Q02548 391 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 ZNF90Q03938 601 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 TM4SF20Q53R12 229 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 SLC24A4Q8NFF2 622 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 ZNRF4Q8WWF5 429 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 OR2A7Q96R45 310 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 NRIP2Q9BQI9 281 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 G6PC2Q9NQR9 355 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 DPM3Q9P2X0 92 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 VSIG4Q9Y279 399 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 TRBV5-5A0A0J9YX44 114 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 PPP5D1E7EU14 171 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 F5H697 171 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 OR2C1O95371 312 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 TMEM50BP56557 158 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 AMELYQ99218 206 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 CABLES2Q9BTV7 478 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 PLCE1Q9P212 2302 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 PTPRQQ9UMZ3 2332 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 CEACAM18A8MTB9 384 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 SLC25A17O43808 307 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 TBX6O95947 436 aaPredicted RBP9.15□□□□□ -0.94
PTCH1-206ENST00000421141 INHBBP09529 407 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 TVP23CQ96ET8 276 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 QTRT1Q9BXR0 403 aaKnown RBP9.15□□□□□ -0.94
PTCH1-206ENST00000421141 TUBA4BQ9H853 241 aa9.15□□□□□ -0.94
PTCH1-206ENST00000421141 NCOA6Q14686 2063 aaPredicted RBP9.15□□□□□ -0.95
PTCH1-206ENST00000421141 POLR2GP62487 172 aaKnown RBP eCLIP9.15□□□□□ -0.95
PTCH1-206ENST00000421141 IZUMO4Q1ZYL8 232 aa9.15□□□□□ -0.95
PTCH1-206ENST00000421141 AQP3Q92482 292 aa9.15□□□□□ -0.95
PTCH1-206ENST00000421141 SLC25A28Q96A46 364 aa9.15□□□□□ -0.95
PTCH1-206ENST00000421141 NUP210LQ5VU65 1888 aa9.15□□□□□ -0.95
PTCH1-206ENST00000421141 IGKV3D-15A0A087WSY6 115 aa9.15□□□□□ -0.95
PTCH1-206ENST00000421141 ZNF705FA8MVS1 300 aaPredicted RBP9.15□□□□□ -0.95
PTCH1-206ENST00000421141 TRIM77I1YAP6 450 aa9.15□□□□□ -0.95
PTCH1-206ENST00000421141 M0QZK8 103 aa9.15□□□□□ -0.95
PTCH1-206ENST00000421141 ZNF705DP0CH99 300 aaPredicted RBP9.15□□□□□ -0.95
PTCH1-206ENST00000421141 ZNF705BP0CI00 300 aaPredicted RBP9.15□□□□□ -0.95
PTCH1-206ENST00000421141 IRF3Q14653 427 aa9.15□□□□□ -0.95
PTCH1-206ENST00000421141 RPEL1Q2QD12 228 aa9.15□□□□□ -0.95
PTCH1-206ENST00000421141 H3F3CQ6NXT2 135 aa9.15□□□□□ -0.95
PTCH1-206ENST00000421141 FDX2Q6P4F2 183 aa9.15□□□□□ -0.95
PTCH1-206ENST00000421141 IGHV1-18A0A0C4DH31 117 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms