RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 CA2P00918 260 aa12.89□□□□□ -0.35
UPF3AP3-201ENST00000420996 ARSBP15848 533 aa12.89□□□□□ -0.35
UPF3AP3-201ENST00000420996 HAGHQ16775 308 aa12.89□□□□□ -0.35
UPF3AP3-201ENST00000420996 TSNAXQ99598 290 aaKnown RBP12.89□□□□□ -0.35
UPF3AP3-201ENST00000420996 PARP12Q9H0J9 701 aaKnown RBP12.89□□□□□ -0.35
UPF3AP3-201ENST00000420996 S100A14Q9HCY8 104 aa12.89□□□□□ -0.35
UPF3AP3-201ENST00000420996 ZNF355PQ9NSJ1 428 aa12.89□□□□□ -0.35
UPF3AP3-201ENST00000420996 STARD9Q9P2P6 4700 aa12.89□□□□□ -0.35
UPF3AP3-201ENST00000420996 A0A0G2JLM5 398 aa12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 C13orf42A0A1B0GVH6 325 aa12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 H0Y980 276 aa12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 H3BUA1 57 aa12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 SPDEFO95238 335 aa12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 SNRPBP14678 240 aaKnown RBP12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 CELP19835 753 aa12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 MAPK3P27361 379 aaPredicted RBP12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 RPS27AP62979 156 aaKnown RBP12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 ST3GAL4Q11206 333 aa12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 KLF5Q13887 457 aaPredicted RBP12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 MOGAT2Q3SYC2 334 aa12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 OR10K2Q6IF99 312 aa12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 MOB1BQ7L9L4 216 aa12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 POC5Q8NA72 575 aa12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 GGHQ92820 318 aa12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 TMEM59Q9BXS4 323 aa12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 CHMP1AQ9HD42 196 aaPredicted RBP12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 TNCP24821 2201 aa12.88□□□□□ -0.35
UPF3AP3-201ENST00000420996 CSMD3Q7Z407 3707 aa12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 EFCAB10A6NFE3 127 aa12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 IFNA6P05013 189 aa12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 CPEP16870 476 aa12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 HTR2CP28335 458 aa12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 CEACAM6P40199 344 aa12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 RPS16P62249 146 aaKnown RBP12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 FXYD3Q14802 87 aa12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 IL34Q6ZMJ4 242 aa12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 DRAXINQ8NBI3 349 aaPredicted RBP12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 OR9G4Q8NGQ1 327 aa12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 KCNG3Q8TAE7 436 aa12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 SETD6Q8TBK2 473 aa12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 EDARADDQ8WWZ3 215 aa12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 C11orf54Q9H0W9 315 aaPredicted RBP12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 RIMS4Q9H426 269 aaPredicted RBP12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 NKX1-2Q9UD57 310 aaPredicted RBP12.87□□□□□ -0.35
UPF3AP3-201ENST00000420996 TRBV6-6A0A0A6YYG2 114 aa12.86□□□□□ -0.35
UPF3AP3-201ENST00000420996 ANKRD34BA5PLL1 514 aa12.86□□□□□ -0.35
UPF3AP3-201ENST00000420996 PROP1O75360 226 aa12.86□□□□□ -0.35
UPF3AP3-201ENST00000420996 IGKV1-16P04430 117 aa12.86□□□□□ -0.35
UPF3AP3-201ENST00000420996 ZBTB25P24278 435 aa12.86□□□□□ -0.35
UPF3AP3-201ENST00000420996 C1orf100Q5SVJ3 147 aa12.86□□□□□ -0.35
UPF3AP3-201ENST00000420996 OR5T1Q8NG75 326 aa12.86□□□□□ -0.35
UPF3AP3-201ENST00000420996 GRPEL2Q8TAA5 225 aa12.86□□□□□ -0.35
UPF3AP3-201ENST00000420996 THAP7Q9BT49 309 aaPredicted RBP12.86□□□□□ -0.35
UPF3AP3-201ENST00000420996 TM2D1Q9BX74 207 aa12.86□□□□□ -0.35
UPF3AP3-201ENST00000420996 TUBA4BQ9H853 241 aa12.86□□□□□ -0.35
UPF3AP3-201ENST00000420996 WNT4P56705 351 aa12.85□□□□□ -0.35
UPF3AP3-201ENST00000420996 SYNJ2BPP57105 145 aa12.85□□□□□ -0.35
UPF3AP3-201ENST00000420996 TTC23Q5W5X9 447 aa12.85□□□□□ -0.35
UPF3AP3-201ENST00000420996 GLT8D1Q68CQ7 371 aa12.85□□□□□ -0.35
UPF3AP3-201ENST00000420996 GTSCR1Q86UQ5 136 aa12.85□□□□□ -0.35
UPF3AP3-201ENST00000420996 PDPNQ86YL7 162 aa12.85□□□□□ -0.35
UPF3AP3-201ENST00000420996 SETD9Q8NE22 299 aa12.85□□□□□ -0.35
UPF3AP3-201ENST00000420996 PTX4Q96A99 478 aa12.85□□□□□ -0.35
UPF3AP3-201ENST00000420996 NICN1Q9BSH3 213 aa12.85□□□□□ -0.35
UPF3AP3-201ENST00000420996 PLEKHJ1Q9NW61 149 aa12.85□□□□□ -0.35
UPF3AP3-201ENST00000420996 SIGLEC8Q9NYZ4 499 aa12.85□□□□□ -0.35
UPF3AP3-201ENST00000420996 OR1A1Q9P1Q5 309 aa12.85□□□□□ -0.35
UPF3AP3-201ENST00000420996 MGAT4AQ9UM21 535 aa12.85□□□□□ -0.35
UPF3AP3-201ENST00000420996 SLC25A17O43808 307 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 JTBO76095 146 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 CNIH1O95406 144 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 BRI3O95415 125 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 APOA2P02652 100 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 LINC00205P59089 165 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 QRFPP83859 136 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 UNC119Q13432 240 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 LCN12Q6JVE5 192 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 LRRTM1Q86UE6 522 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 ZNF383Q8NA42 475 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 CYGBQ8WWM9 190 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 TMEM68Q96MH6 324 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 TMED9Q9BVK6 235 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 ZNF221Q9UK13 617 aa12.84□□□□□ -0.35
UPF3AP3-201ENST00000420996 TMEM14DPA8MWL7 114 aa12.83□□□□□ -0.36
UPF3AP3-201ENST00000420996 MYL12BO14950 172 aa12.83□□□□□ -0.36
UPF3AP3-201ENST00000420996 AADACP22760 399 aa12.83□□□□□ -0.36
UPF3AP3-201ENST00000420996 HLA-DRB3P79483 266 aa12.83□□□□□ -0.36
UPF3AP3-201ENST00000420996 SSBP2P81877 361 aaPredicted RBP12.83□□□□□ -0.36
UPF3AP3-201ENST00000420996 INSL4Q14641 139 aa12.83□□□□□ -0.36
UPF3AP3-201ENST00000420996 TATDN3Q17R31 274 aa12.83□□□□□ -0.36
UPF3AP3-201ENST00000420996 ACSM3Q53FZ2 586 aa12.83□□□□□ -0.36
UPF3AP3-201ENST00000420996 ZNF343Q6P1L6 599 aa12.83□□□□□ -0.36
UPF3AP3-201ENST00000420996 Q8N402 240 aa12.83□□□□□ -0.36
UPF3AP3-201ENST00000420996 IL17DQ8TAD2 202 aa12.83□□□□□ -0.36
UPF3AP3-201ENST00000420996 PHYHIPQ92561 330 aa12.83□□□□□ -0.36
UPF3AP3-201ENST00000420996 PEF1Q9UBV8 284 aaKnown RBP12.83□□□□□ -0.36
UPF3AP3-201ENST00000420996 A0A0A6YYD4 124 aa12.82□□□□□ -0.36
UPF3AP3-201ENST00000420996 CSN3P07498 182 aa12.82□□□□□ -0.36
UPF3AP3-201ENST00000420996 CD37P11049 281 aa12.82□□□□□ -0.36
UPF3AP3-201ENST00000420996 RBM48Q5RL73 367 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms