RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 PDCD6O75340 191 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 IGKV1-16P04430 117 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 SYNJ2BPP57105 145 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 HTD2P86397 168 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 PJVKQ0ZLH3 352 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 PSG5Q15238 335 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 TRAT1Q6PIZ9 186 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 AHSA2Q719I0 299 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 ANKRD13BQ86YJ7 626 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 OR5T1Q8NG75 326 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 FLYWCH2Q96CP2 140 aaKnown RBP9.8□□□□□ -0.84
LINC00339-203ENST00000420503 MYCBPQ99417 103 aaPredicted RBP9.8□□□□□ -0.84
LINC00339-203ENST00000420503 TMED9Q9BVK6 235 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 WFDC10AQ9H1F0 79 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 KCNIP1Q9NZI2 227 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 RNF150Q9ULK6 438 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 EXOSC1Q9Y3B2 195 aaKnown RBP9.8□□□□□ -0.84
LINC00339-203ENST00000420503 SELENOKQ9Y6D0 94 aa9.8□□□□□ -0.84
LINC00339-203ENST00000420503 H7C2Y5 167 aa9.79□□□□□ -0.84
LINC00339-203ENST00000420503 APELAP0DMC3 54 aa9.79□□□□□ -0.84
LINC00339-203ENST00000420503 EDN2P20800 178 aa9.79□□□□□ -0.84
LINC00339-203ENST00000420503 DYRK1AQ13627 763 aa9.79□□□□□ -0.84
LINC00339-203ENST00000420503 GPR176Q14439 515 aa9.79□□□□□ -0.84
LINC00339-203ENST00000420503 SVOPQ8N4V2 548 aa9.79□□□□□ -0.84
LINC00339-203ENST00000420503 ZNF383Q8NA42 475 aa9.79□□□□□ -0.84
LINC00339-203ENST00000420503 GALMQ96C23 342 aa9.79□□□□□ -0.84
LINC00339-203ENST00000420503 DERL3Q96Q80 235 aa9.79□□□□□ -0.84
LINC00339-203ENST00000420503 PLEKHA3Q9HB20 300 aa9.79□□□□□ -0.84
LINC00339-203ENST00000420503 RAB9BQ9NP90 201 aa9.79□□□□□ -0.84
LINC00339-203ENST00000420503 ZNF355PQ9NSJ1 428 aa9.79□□□□□ -0.84
LINC00339-203ENST00000420503 A0A0A6YYD4 124 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 DENRO43583 198 aaKnown RBP9.78□□□□□ -0.84
LINC00339-203ENST00000420503 CA11O75493 328 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 RGS11O94810 467 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 CDK1P06493 297 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 CSN3P07498 182 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 GSTP1P09211 210 aaKnown RBP9.78□□□□□ -0.84
LINC00339-203ENST00000420503 CRHBPP24387 322 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 HTR2CP28335 458 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 KLF5Q13887 457 aaPredicted RBP9.78□□□□□ -0.84
LINC00339-203ENST00000420503 AKIRIN2Q53H80 203 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 RNLSQ5VYX0 342 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 TMPRSS11AQ6ZMR5 421 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 TCTEX1D1Q8N7M0 179 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 OR5AN1Q8NGI8 311 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 OR9G4Q8NGQ1 327 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 SETD6Q8TBK2 473 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 CNBD2Q96M20 576 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 AGMATQ9BSE5 352 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 ELOVL1Q9BW60 279 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 HIPK2Q9H2X6 1198 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 DUSP21Q9H596 190 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 CKLFQ9UBR5 152 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 SLC23A1Q9UHI7 598 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 ERGIC3Q9Y282 383 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 WASHC3Q9Y3C0 194 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 FRAS1Q86XX4 4008 aa9.78□□□□□ -0.84
LINC00339-203ENST00000420503 FAM90A7PA6NKC0 464 aa9.77□□□□□ -0.85
LINC00339-203ENST00000420503 FAM90A23PA8MXZ1 464 aa9.77□□□□□ -0.85
LINC00339-203ENST00000420503 SLC25A17O43808 307 aa9.77□□□□□ -0.85
LINC00339-203ENST00000420503 MYL12AP19105 171 aa9.77□□□□□ -0.85
LINC00339-203ENST00000420503 UNC119Q13432 240 aa9.77□□□□□ -0.85
LINC00339-203ENST00000420503 FXYD3Q14802 87 aa9.77□□□□□ -0.85
LINC00339-203ENST00000420503 YIF1BQ5BJH7 314 aa9.77□□□□□ -0.85
LINC00339-203ENST00000420503 LY6G6FQ5SQ64 297 aa9.77□□□□□ -0.85
LINC00339-203ENST00000420503 POC5Q8NA72 575 aa9.77□□□□□ -0.85
LINC00339-203ENST00000420503 C11orf54Q9H0W9 315 aaPredicted RBP9.77□□□□□ -0.85
LINC00339-203ENST00000420503 SCN3BQ9NY72 215 aa9.77□□□□□ -0.85
LINC00339-203ENST00000420503 OR5H14A6NHG9 310 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 PTGES3LE9PB15 166 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 RAB29O14966 203 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 BRI3O95415 125 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 NAPSAO96009 420 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 IGLV2-23P01705 113 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 TFAP2AP05549 437 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 TMEM267Q0VDI3 215 aaPredicted RBP9.76□□□□□ -0.85
LINC00339-203ENST00000420503 MED21Q13503 144 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 IRF3Q14653 427 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 MRGPRG-AS1Q2M3A8 158 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 RBM48Q5RL73 367 aaKnown RBP9.76□□□□□ -0.85
LINC00339-203ENST00000420503 PYHIN1Q6K0P9 492 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 FAM71F2Q6NXP2 309 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 ZNF880Q6PDB4 577 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 ZNF562Q6V9R5 426 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 LINC00322Q6ZN03 302 aaPredicted RBP9.76□□□□□ -0.85
LINC00339-203ENST00000420503 ZNF554Q86TJ5 538 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 NANOGP1Q8N7R0 232 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 C5orf30Q96GV9 206 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 TUBA4BQ9H853 241 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 RANGRFQ9HD47 186 aaPredicted RBP9.76□□□□□ -0.85
LINC00339-203ENST00000420503 PIPOXQ9P0Z9 390 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 LSM2Q9Y333 95 aaKnown RBP9.76□□□□□ -0.85
LINC00339-203ENST00000420503 TPRKBQ9Y3C4 175 aa9.76□□□□□ -0.85
LINC00339-203ENST00000420503 IGKV1-6A0A0C4DH72 117 aa9.75□□□□□ -0.85
LINC00339-203ENST00000420503 C13orf42A0A1B0GVH6 325 aa9.75□□□□□ -0.85
LINC00339-203ENST00000420503 RBMY1BA6NDE4 496 aaKnown RBP9.75□□□□□ -0.85
LINC00339-203ENST00000420503 RBMY1EA6NEQ0 496 aaKnown RBP9.75□□□□□ -0.85
LINC00339-203ENST00000420503 JTBO76095 146 aa9.75□□□□□ -0.85
LINC00339-203ENST00000420503 GLAP06280 429 aa9.75□□□□□ -0.85
LINC00339-203ENST00000420503 CD7P09564 240 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms