RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 LUMP51884 338 aaPredicted RBP16.26■□□□□ 0.19
EGFR-204ENST00000420316 TAS2R46P59540 309 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 MRPS10P82664 201 aaKnown RBP16.26■□□□□ 0.19
EGFR-204ENST00000420316 DYRK1AQ13627 763 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 HES1Q14469 280 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.26■□□□□ 0.19
EGFR-204ENST00000420316 ZNF2Q9BSG1 426 aaPredicted RBP16.26■□□□□ 0.19
EGFR-204ENST00000420316 C19orf24Q9BVV8 132 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 GHITMQ9H3K2 345 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 SDHAF2Q9NX18 166 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 PITPNC1Q9UKF7 332 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 TCF19Q9Y242 345 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 M0R1X1 148 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 GSTZ1O43708 216 aaPredicted RBP16.26■□□□□ 0.19
EGFR-204ENST00000420316 CHST1O43916 411 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 ACTBP60709 375 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 ACTG1P63261 375 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 LIAT1Q6ZQX7 453 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 TMEM17Q86X19 198 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 SECTM1Q8WVN6 248 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 GPHA2Q96T91 129 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 S1PR3Q99500 378 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 MDFIQ99750 246 aa16.26■□□□□ 0.19
EGFR-204ENST00000420316 A6NDX4 124 aa16.25■□□□□ 0.19
EGFR-204ENST00000420316 PPYP01298 95 aa16.25■□□□□ 0.19
EGFR-204ENST00000420316 IGKV1D-33P01593 117 aa16.25■□□□□ 0.19
EGFR-204ENST00000420316 IGKV1-33P01594 117 aa16.25■□□□□ 0.19
EGFR-204ENST00000420316 Q8N402 240 aa16.25■□□□□ 0.19
EGFR-204ENST00000420316 THAP7Q9BT49 309 aaPredicted RBP16.25■□□□□ 0.19
EGFR-204ENST00000420316 PTTG2Q9NZH5 202 aa16.25■□□□□ 0.19
EGFR-204ENST00000420316 RABL2AQ9UBK7 228 aaPredicted RBP16.25■□□□□ 0.19
EGFR-204ENST00000420316 RABL2BQ9UNT1 228 aa16.25■□□□□ 0.19
EGFR-204ENST00000420316 RBMX2Q9Y388 322 aaKnown RBP16.25■□□□□ 0.19
EGFR-204ENST00000420316 TXNL1O43396 289 aa16.24■□□□□ 0.19
EGFR-204ENST00000420316 CRYBA1P05813 215 aa16.24■□□□□ 0.19
EGFR-204ENST00000420316 CT45A6P0DMU7 189 aa16.24■□□□□ 0.19
EGFR-204ENST00000420316 CT45A5P0DMU8 189 aa16.24■□□□□ 0.19
EGFR-204ENST00000420316 CT45A7P0DMV0 189 aa16.24■□□□□ 0.19
EGFR-204ENST00000420316 ETV6P41212 452 aa16.24■□□□□ 0.19
EGFR-204ENST00000420316 TSPAN5P62079 268 aa16.24■□□□□ 0.19
EGFR-204ENST00000420316 LSAMPQ13449 338 aa16.24■□□□□ 0.19
EGFR-204ENST00000420316 ZNF660Q6AZW8 331 aaPredicted RBP16.24■□□□□ 0.19
EGFR-204ENST00000420316 THNSL2Q86YJ6 484 aa16.24■□□□□ 0.19
EGFR-204ENST00000420316 TMEM229BQ8NBD8 167 aa16.24■□□□□ 0.19
EGFR-204ENST00000420316 GIMAP1Q8WWP7 306 aa16.24■□□□□ 0.19
EGFR-204ENST00000420316 SRRQ9GZT4 340 aa16.24■□□□□ 0.19
EGFR-204ENST00000420316 RAB18Q9NP72 206 aa16.24■□□□□ 0.19
EGFR-204ENST00000420316 CCL28Q9NRJ3 127 aa16.24■□□□□ 0.19
EGFR-204ENST00000420316 FAM90A9PA6NNJ1 464 aa16.23■□□□□ 0.19
EGFR-204ENST00000420316 HKR1P10072 659 aa16.23■□□□□ 0.19
EGFR-204ENST00000420316 HABP2Q14520 560 aaPredicted RBP16.23■□□□□ 0.19
EGFR-204ENST00000420316 RNASE10Q5GAN6 216 aaKnown RBP16.23■□□□□ 0.19
EGFR-204ENST00000420316 STEAP1BQ6NZ63 245 aa16.23■□□□□ 0.19
EGFR-204ENST00000420316 IGLV2-14P01704 120 aa16.22■□□□□ 0.19
EGFR-204ENST00000420316 TAS2R19P59542 299 aa16.22■□□□□ 0.19
EGFR-204ENST00000420316 HERV-K104P61576 105 aa16.22■□□□□ 0.19
EGFR-204ENST00000420316 DHRS11Q6UWP2 260 aa16.22■□□□□ 0.19
EGFR-204ENST00000420316 ZNF383Q8NA42 475 aa16.22■□□□□ 0.19
EGFR-204ENST00000420316 RITA1Q96K30 269 aa16.22■□□□□ 0.19
EGFR-204ENST00000420316 SDHCQ99643 169 aaPredicted RBP16.22■□□□□ 0.19
EGFR-204ENST00000420316 SLC5A7Q9GZV3 580 aa16.22■□□□□ 0.19
EGFR-204ENST00000420316 FXYD6Q9H0Q3 95 aa16.22■□□□□ 0.19
EGFR-204ENST00000420316 TMEM89A2RUT3 159 aa16.21■□□□□ 0.19
EGFR-204ENST00000420316 SH2D7A6NKC9 451 aaPredicted RBP16.21■□□□□ 0.19
EGFR-204ENST00000420316 TNFSF12O43508 249 aa16.21■□□□□ 0.19
EGFR-204ENST00000420316 RAB3DO95716 219 aa16.21■□□□□ 0.19
EGFR-204ENST00000420316 FAM106CPP0CH98 169 aa16.21■□□□□ 0.19
EGFR-204ENST00000420316 BAK1Q16611 211 aa16.21■□□□□ 0.19
EGFR-204ENST00000420316 FAM71F2Q6NXP2 309 aa16.21■□□□□ 0.19
EGFR-204ENST00000420316 MFSD4AQ8N468 514 aa16.21■□□□□ 0.19
EGFR-204ENST00000420316 ZNF645Q8N7E2 425 aa16.21■□□□□ 0.19
EGFR-204ENST00000420316 OR6F1Q8NGZ6 308 aa16.21■□□□□ 0.19
EGFR-204ENST00000420316 TRIM63Q969Q1 353 aa16.21■□□□□ 0.19
EGFR-204ENST00000420316 C1RLQ9NZP8 487 aa16.21■□□□□ 0.19
EGFR-204ENST00000420316 ANKRD20A5PA0PJZ0 165 aa16.21■□□□□ 0.18
EGFR-204ENST00000420316 OR5H14A6NHG9 310 aa16.21■□□□□ 0.18
EGFR-204ENST00000420316 CD74P04233 296 aa16.21■□□□□ 0.18
EGFR-204ENST00000420316 IFNA6P05013 189 aa16.21■□□□□ 0.18
EGFR-204ENST00000420316 CSF1P09603 554 aa16.21■□□□□ 0.18
EGFR-204ENST00000420316 TMEM11P17152 192 aa16.21■□□□□ 0.18
EGFR-204ENST00000420316 RELBQ01201 579 aa16.21■□□□□ 0.18
EGFR-204ENST00000420316 VAX1Q5SQQ9 334 aa16.21■□□□□ 0.18
EGFR-204ENST00000420316 DHRS7BQ6IAN0 325 aaPredicted RBP16.21■□□□□ 0.18
EGFR-204ENST00000420316 OR4C16Q8NGL9 310 aa16.21■□□□□ 0.18
EGFR-204ENST00000420316 EAF1Q96JC9 268 aaPredicted RBP16.21■□□□□ 0.18
EGFR-204ENST00000420316 SLC25A33Q9BSK2 321 aa16.21■□□□□ 0.18
EGFR-204ENST00000420316 AKIP1Q9NQ31 210 aa16.21■□□□□ 0.18
EGFR-204ENST00000420316 LINC00473A8K010 186 aa16.2■□□□□ 0.18
EGFR-204ENST00000420316 AMY2AP04746 511 aa16.2■□□□□ 0.18
EGFR-204ENST00000420316 PTBP1P26599 531 aaKnown RBP eCLIP16.2■□□□□ 0.182e-7■■■□□ 16.8
EGFR-204ENST00000420316 CNTFRP26992 372 aa16.2■□□□□ 0.18
EGFR-204ENST00000420316 CD1BP29016 333 aa16.2■□□□□ 0.18
EGFR-204ENST00000420316 RPL30P62888 115 aaKnown RBP16.2■□□□□ 0.18
EGFR-204ENST00000420316 SSBP1Q04837 148 aaKnown RBP16.2■□□□□ 0.18
EGFR-204ENST00000420316 SCGB2B2Q4G0G5 96 aa16.2■□□□□ 0.18
EGFR-204ENST00000420316 ACTBL2Q562R1 376 aa16.2■□□□□ 0.18
EGFR-204ENST00000420316 OR2B11Q5JQS5 317 aa16.2■□□□□ 0.18
EGFR-204ENST00000420316 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.2■□□□□ 0.18
EGFR-204ENST00000420316 MOB3AQ96BX8 217 aa16.2■□□□□ 0.18
EGFR-204ENST00000420316 TAS2R8Q9NYW2 309 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms