RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 HES1Q14469 280 aa8.36□□□□□ -1.07
RFC1-203ENST00000418436 HNF4GQ14541 408 aa8.36□□□□□ -1.07
RFC1-203ENST00000418436 CLVS1Q8IUQ0 354 aaPredicted RBP8.36□□□□□ -1.07
RFC1-203ENST00000418436 H1FOOQ8IZA3 346 aaPredicted RBP8.36□□□□□ -1.07
RFC1-203ENST00000418436 C5orf56Q8N8D9 126 aa8.36□□□□□ -1.07
RFC1-203ENST00000418436 OR10J5Q8NHC4 309 aa8.36□□□□□ -1.07
RFC1-203ENST00000418436 WIPF2Q8TF74 440 aaPredicted RBP8.36□□□□□ -1.07
RFC1-203ENST00000418436 RAB2BQ8WUD1 216 aa8.36□□□□□ -1.07
RFC1-203ENST00000418436 S1PR3Q99500 378 aa8.36□□□□□ -1.07
RFC1-203ENST00000418436 ST6GALNAC5Q9BVH7 336 aa8.36□□□□□ -1.07
RFC1-203ENST00000418436 MRPL20Q9BYC9 149 aaKnown RBP8.36□□□□□ -1.07
RFC1-203ENST00000418436 WNT10AQ9GZT5 417 aa8.36□□□□□ -1.07
RFC1-203ENST00000418436 PLSCR3Q9NRY6 295 aa8.36□□□□□ -1.07
RFC1-203ENST00000418436 COMMD3Q9UBI1 195 aa8.36□□□□□ -1.07
RFC1-203ENST00000418436 MOSP00540 346 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 EIF4EP06730 217 aaKnown RBP8.35□□□□□ -1.07
RFC1-203ENST00000418436 CTXN2P0C2S0 81 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 CT45A6P0DMU7 189 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 CT45A5P0DMU8 189 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 CT45A7P0DMV0 189 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 PTHLHP12272 177 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 ADMP35318 185 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 TAS2R20P59543 309 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 SPCS2Q15005 226 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 ABCA11PQ4W5N1 156 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 RPL39P5Q59GN2 51 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 CNIH2Q6PI25 160 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 HOGA1Q86XE5 327 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 OR8H1Q8NGG4 311 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 AP3S1Q92572 193 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 SCOCQ9UIL1 159 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 ANXA10Q9UJ72 324 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 RNF150Q9ULK6 438 aa8.35□□□□□ -1.07
RFC1-203ENST00000418436 HPGDSO60760 199 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 HLA-DQB1P01920 261 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 OR8U9P0C7N5 309 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 ELK1P19419 428 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 CBX5P45973 191 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 TMEM69Q5SWH9 247 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 MZT2AQ6P582 158 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 KLHDC1Q8N7A1 406 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 GVQW1Q8N7I0 195 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 Q8N9W7 124 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.34□□□□□ -1.07
RFC1-203ENST00000418436 BEST4Q8NFU0 473 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 OR5AN1Q8NGI8 311 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 OR8U1Q8NH10 309 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 RBMXL1Q96E39 390 aaKnown RBP8.34□□□□□ -1.07
RFC1-203ENST00000418436 ZNF221Q9UK13 617 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 ANAPC10Q9UM13 185 aa8.34□□□□□ -1.07
RFC1-203ENST00000418436 OR5H14A6NHG9 310 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 SH2D7A6NKC9 451 aaPredicted RBP8.33□□□□□ -1.08
RFC1-203ENST00000418436 H0YJW9 148 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 MC5RP33032 325 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 VDAC2P45880 294 aaPredicted RBP8.33□□□□□ -1.08
RFC1-203ENST00000418436 GPR12P47775 334 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 F2RL1P55085 397 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 TMEM95Q3KNT9 176 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 FAM71E2Q8N5Q1 922 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 SGMS2Q8NHU3 365 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 DYNC2LI1Q8TCX1 351 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 SNAPC3Q92966 411 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 C5orf30Q96GV9 206 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 RITA1Q96K30 269 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 GINS4Q9BRT9 223 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 LIN7CQ9NUP9 197 aaKnown RBP8.33□□□□□ -1.08
RFC1-203ENST00000418436 SDHAF2Q9NX18 166 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 OR2W1Q9Y3N9 320 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 CEPT1Q9Y6K0 416 aa8.33□□□□□ -1.08
RFC1-203ENST00000418436 SMIM31A0A1B0GVY4 71 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 NCBP2LA6PVI3 153 aaKnown RBP8.32□□□□□ -1.08
RFC1-203ENST00000418436 H3BMQ9 156 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 TUSC2O75896 110 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 IGHG2P01859 326 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 VSIG10L2P0DP72 767 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 NAT1P18440 290 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 PRSS3P35030 304 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 SOX6P35712 828 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 ACTBP60709 375 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 FAM131AQ6UXB0 335 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 GLDNQ6ZMI3 551 aaPredicted RBP8.32□□□□□ -1.08
RFC1-203ENST00000418436 ZNF383Q8NA42 475 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 NPBQ8NG41 125 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 GPX8Q8TED1 209 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 ISOC1Q96CN7 298 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 KRTAP9-2Q9BYQ4 174 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 OR2D2Q9H210 308 aa8.32□□□□□ -1.08
RFC1-203ENST00000418436 CCDC59Q9P031 241 aaKnown RBP8.32□□□□□ -1.08
RFC1-203ENST00000418436 TET2Q6N021 2002 aaPredicted RBP8.32□□□□□ -1.08
RFC1-203ENST00000418436 M0R1X1 148 aa8.31□□□□□ -1.08
RFC1-203ENST00000418436 TPPPO94811 219 aa8.31□□□□□ -1.08
RFC1-203ENST00000418436 NDUFA3O95167 84 aa8.31□□□□□ -1.08
RFC1-203ENST00000418436 IGLV2-14P01704 120 aa8.31□□□□□ -1.08
RFC1-203ENST00000418436 NFYAP23511 347 aaPredicted RBP8.31□□□□□ -1.08
RFC1-203ENST00000418436 LINC00205P59089 165 aa8.31□□□□□ -1.08
RFC1-203ENST00000418436 ARPC4P59998 168 aa8.31□□□□□ -1.08
RFC1-203ENST00000418436 C9orf152Q5JTZ5 239 aa8.31□□□□□ -1.08
RFC1-203ENST00000418436 PRR31Q5SQ13 230 aa8.31□□□□□ -1.08
RFC1-203ENST00000418436 DRAXINQ8NBI3 349 aaPredicted RBP8.31□□□□□ -1.08
RFC1-203ENST00000418436 OR5AP2Q8NGF4 316 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms