RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 PKDREJQ9NTG1 2253 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 FAM90A26D6RGX4 464 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 WRBO00258 174 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 IGKV1-5P01602 117 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 TMEM33P57088 247 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 RPL30P62888 115 aaKnown RBP13.88□□□□□ -0.19
SSBP3-205ENST00000417664 VAMP2P63027 116 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 CXorf66Q5JRM2 361 aaPredicted RBP13.88□□□□□ -0.19
SSBP3-205ENST00000417664 PDZD9Q8IXQ8 264 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 SPAG16Q8N0X2 631 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 OR2C3Q8N628 320 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 RAB1BQ9H0U4 201 aa13.88□□□□□ -0.19
SSBP3-205ENST00000417664 RPUSD1Q9UJJ7 312 aaKnown RBP13.88□□□□□ -0.19
SSBP3-205ENST00000417664 A0A0G2JRQ6 117 aa13.87□□□□□ -0.19
SSBP3-205ENST00000417664 MEX3AA1L020 520 aaKnown RBP13.87□□□□□ -0.19
SSBP3-205ENST00000417664 RBFOX2O43251 390 aaKnown RBP eCLIP13.87□□□□□ -0.193e-6■□□□□ 10.7
SSBP3-205ENST00000417664 ZG16O60844 167 aa13.87□□□□□ -0.19
SSBP3-205ENST00000417664 RRASP10301 218 aa13.87□□□□□ -0.19
SSBP3-205ENST00000417664 DUTP33316 252 aaKnown RBP13.87□□□□□ -0.19
SSBP3-205ENST00000417664 KIR2DS2P43631 304 aa13.87□□□□□ -0.19
SSBP3-205ENST00000417664 POLR2GP62487 172 aaKnown RBP eCLIP13.87□□□□□ -0.19
SSBP3-205ENST00000417664 MRPS11P82912 194 aaKnown RBP13.87□□□□□ -0.19
SSBP3-205ENST00000417664 RAB39BQ96DA2 213 aa13.87□□□□□ -0.19
SSBP3-205ENST00000417664 RAB40CQ96S21 281 aa13.87□□□□□ -0.19
SSBP3-205ENST00000417664 IFI27L2Q9H2X8 130 aa13.87□□□□□ -0.19
SSBP3-205ENST00000417664 LYRM2Q9NU23 88 aaPredicted RBP13.87□□□□□ -0.19
SSBP3-205ENST00000417664 ITPR1Q14643 2758 aa13.87□□□□□ -0.19
SSBP3-205ENST00000417664 RAB29O14966 203 aa13.86□□□□□ -0.19
SSBP3-205ENST00000417664 OMGP23515 440 aa13.86□□□□□ -0.19
SSBP3-205ENST00000417664 UBAC2Q8NBM4 344 aa13.86□□□□□ -0.19
SSBP3-205ENST00000417664 CACNG5Q9UF02 275 aa13.86□□□□□ -0.19
SSBP3-205ENST00000417664 FBXL17Q9UF56 701 aa13.86□□□□□ -0.19
SSBP3-205ENST00000417664 PRELID3BQ9Y3B1 194 aa13.86□□□□□ -0.19
SSBP3-205ENST00000417664 HIVEP3Q5T1R4 2406 aa13.86□□□□□ -0.19
SSBP3-205ENST00000417664 LEUTXA8MZ59 168 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 TOR1AO14656 332 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 EPHA1P21709 976 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 UQCRFS1P47985 274 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 ARHGDIBP52566 201 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 ZNF134P52741 427 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 BAXQ07812 192 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 HEPN1Q6WQI6 88 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 ZNF439Q8NDP4 499 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 NEU4Q8WWR8 484 aaPredicted RBP13.85□□□□□ -0.19
SSBP3-205ENST00000417664 ADTRPQ96IZ2 230 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 ZNF714Q96N38 554 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 BORCS7-ASMTA0A0B4J1R7 106 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 LINC00473A8K010 186 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 C17orf98A8MV24 154 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 KIAA1324LA8MWY0 1029 aaPredicted RBP13.85□□□□□ -0.19
SSBP3-205ENST00000417664 GPR37O15354 613 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 SSSCA1O60232 199 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 RAMP3O60896 148 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 P0C879 139 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 DAOP14920 347 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 BRWD1-AS2P59051 145 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 CT45A1Q5HYN5 189 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 C11orf71Q6IPW1 123 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 BTNL3Q6UXE8 466 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 DTX2Q86UW9 622 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 CT45A3Q8NHU0 189 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 WSB1Q9Y6I7 421 aa13.85□□□□□ -0.19
SSBP3-205ENST00000417664 USF3Q68DE3 2245 aa13.84□□□□□ -0.19
SSBP3-205ENST00000417664 TRBV23-1A0A0A0MS06 115 aa13.84□□□□□ -0.19
SSBP3-205ENST00000417664 FAM90A9PA6NNJ1 464 aa13.84□□□□□ -0.19
SSBP3-205ENST00000417664 DVL1O14640 695 aa13.84□□□□□ -0.19
SSBP3-205ENST00000417664 CHST1O43916 411 aa13.84□□□□□ -0.19
SSBP3-205ENST00000417664 PROP1O75360 226 aa13.84□□□□□ -0.19
SSBP3-205ENST00000417664 HPRT1P00492 218 aa13.84□□□□□ -0.19
SSBP3-205ENST00000417664 TAS2R30P59541 319 aa13.84□□□□□ -0.19
SSBP3-205ENST00000417664 RPL23AP62750 156 aaKnown RBP13.84□□□□□ -0.19
SSBP3-205ENST00000417664 EWSR1Q01844 656 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■■■□□ 17.9
SSBP3-205ENST00000417664 Q6ZRM9 215 aa13.84□□□□□ -0.19
SSBP3-205ENST00000417664 SLC25A48Q6ZT89 311 aaKnown RBP13.84□□□□□ -0.19
SSBP3-205ENST00000417664 RNF141Q8WVD5 230 aa13.84□□□□□ -0.19
SSBP3-205ENST00000417664 C19orf12Q9NSK7 152 aa13.84□□□□□ -0.19
SSBP3-205ENST00000417664 PFDN2Q9UHV9 154 aa13.84□□□□□ -0.19
SSBP3-205ENST00000417664 ANKRD34BA5PLL1 514 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 M0R1X1 148 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 SYNGR2O43760 224 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 MED6O75586 246 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 S1PR2O95136 353 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 NFYBP25208 207 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 CAV2P51636 162 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 ZNF816Q0VGE8 651 aaPredicted RBP13.83□□□□□ -0.2
SSBP3-205ENST00000417664 TMEM200BQ69YZ2 307 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 RPL7L1Q6DKI1 246 aaKnown RBP13.83□□□□□ -0.2
SSBP3-205ENST00000417664 LYPD2Q6UXB3 125 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 COMMD7Q86VX2 200 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 TMEM252Q8N6L7 170 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 CITED4Q96RK1 184 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 MAGT1Q9H0U3 335 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.83□□□□□ -0.2
SSBP3-205ENST00000417664 CTSZQ9UBR2 303 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 CACFD1Q9UGQ2 172 aa13.83□□□□□ -0.2
SSBP3-205ENST00000417664 KRASP01116 189 aa13.82□□□□□ -0.2
SSBP3-205ENST00000417664 IGHV2-70P01814 119 aa13.82□□□□□ -0.2
SSBP3-205ENST00000417664 THBS3P49746 956 aa13.82□□□□□ -0.2
SSBP3-205ENST00000417664 ZNF273Q14593 569 aa13.82□□□□□ -0.2
SSBP3-205ENST00000417664 NCR3LG1Q68D85 454 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms