RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 FLYWCH2Q96CP2 140 aaKnown RBP11.14□□□□□ -0.63
PAF1-202ENST00000416728 OR4C12Q96R67 309 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 CLCC1Q96S66 551 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 RNF5Q99942 180 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 AGMATQ9BSE5 352 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 FAM103A1Q9BTL3 118 aaKnown RBP11.14□□□□□ -0.63
PAF1-202ENST00000416728 URM1Q9BTM9 101 aaKnown RBP11.14□□□□□ -0.63
PAF1-202ENST00000416728 OR1A1Q9P1Q5 309 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 METTL1Q9UBP6 276 aaKnown RBP11.14□□□□□ -0.63
PAF1-202ENST00000416728 MGAT4AQ9UM21 535 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 GAB2Q9UQC2 676 aa11.14□□□□□ -0.63
PAF1-202ENST00000416728 STAB2Q8WWQ8 2551 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 A0A0A6YYD4 124 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 HSPB1P04792 205 aaKnown RBP11.13□□□□□ -0.63
PAF1-202ENST00000416728 CDK1P06493 297 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 FRMD6-AS1P0C7T7 363 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 CPEP16870 476 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 CEACAM6P40199 344 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 HLA-DRB3P79483 266 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 QRFPP83859 136 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 SPHARQ15513 63 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 RNLSQ5VYX0 342 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 ZNF562Q6V9R5 426 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 DRAXINQ8NBI3 349 aaPredicted RBP11.13□□□□□ -0.63
PAF1-202ENST00000416728 LFNGQ8NES3 379 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 MS4A10Q96PG2 267 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 TSNAXQ99598 290 aaKnown RBP11.13□□□□□ -0.63
PAF1-202ENST00000416728 HDHD3Q9BSH5 251 aaPredicted RBP11.13□□□□□ -0.63
PAF1-202ENST00000416728 C11orf54Q9H0W9 315 aaPredicted RBP11.13□□□□□ -0.63
PAF1-202ENST00000416728 SLA2Q9H6Q3 261 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 AK3Q9UIJ7 227 aa11.13□□□□□ -0.63
PAF1-202ENST00000416728 SOCS1O15524 211 aa11.12□□□□□ -0.63
PAF1-202ENST00000416728 SPDEFO95238 335 aa11.12□□□□□ -0.63
PAF1-202ENST00000416728 CA2P00918 260 aa11.12□□□□□ -0.63
PAF1-202ENST00000416728 TFAP2AP05549 437 aa11.12□□□□□ -0.63
PAF1-202ENST00000416728 UCHL1P09936 223 aa11.12□□□□□ -0.63
PAF1-202ENST00000416728 PSG5Q15238 335 aa11.12□□□□□ -0.63
PAF1-202ENST00000416728 LPAR5Q9H1C0 372 aa11.12□□□□□ -0.63
PAF1-202ENST00000416728 ZMAT4Q9H898 229 aa11.12□□□□□ -0.63
PAF1-202ENST00000416728 PLGRKTQ9HBL7 147 aa11.12□□□□□ -0.63
PAF1-202ENST00000416728 C12orf4Q9NQ89 552 aa11.12□□□□□ -0.63
PAF1-202ENST00000416728 ZNF221Q9UK13 617 aa11.12□□□□□ -0.63
PAF1-202ENST00000416728 SORL1Q92673 2214 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 TRIM64CA6NLI5 447 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 PTGES3LE9PB15 166 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 ARPC1BO15143 372 aaKnown RBP11.11□□□□□ -0.63
PAF1-202ENST00000416728 IGKV1-16P04430 117 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 SCTP09683 121 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 CD37P11049 281 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 ARSBP15848 533 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 RPS16P62249 146 aaKnown RBP11.11□□□□□ -0.63
PAF1-202ENST00000416728 P2RY14Q15391 338 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 MED22Q15528 200 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 SRSF7Q16629 238 aaKnown RBP eCLIP11.11□□□□□ -0.63
PAF1-202ENST00000416728 CASC10Q5T4H9 136 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 OGFRL1Q5TC84 451 aaPredicted RBP11.11□□□□□ -0.63
PAF1-202ENST00000416728 GRPEL2Q8TAA5 225 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 PTX4Q96A99 478 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 RHOVQ96L33 236 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 ELOVL1Q9BW60 279 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 VCXQ9H320 206 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 Q9N2K0 584 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 HSF4Q9ULV5 492 aa11.11□□□□□ -0.63
PAF1-202ENST00000416728 LSM2Q9Y333 95 aaKnown RBP11.11□□□□□ -0.63
PAF1-202ENST00000416728 SLC17A2O00624 439 aa11.1□□□□□ -0.63
PAF1-202ENST00000416728 PROP1O75360 226 aa11.1□□□□□ -0.63
PAF1-202ENST00000416728 APOA2P02652 100 aa11.1□□□□□ -0.63
PAF1-202ENST00000416728 TRGV3P03979 118 aa11.1□□□□□ -0.63
PAF1-202ENST00000416728 LIPKQ5VXJ0 399 aa11.1□□□□□ -0.63
PAF1-202ENST00000416728 PDPNQ86YL7 162 aa11.1□□□□□ -0.63
PAF1-202ENST00000416728 FAM89BQ8N5H3 189 aa11.1□□□□□ -0.63
PAF1-202ENST00000416728 ZNF383Q8NA42 475 aa11.1□□□□□ -0.63
PAF1-202ENST00000416728 UFD1Q92890 307 aa11.1□□□□□ -0.63
PAF1-202ENST00000416728 TMEM203Q969S6 136 aa11.1□□□□□ -0.63
PAF1-202ENST00000416728 ZNF355PQ9NSJ1 428 aa11.1□□□□□ -0.63
PAF1-202ENST00000416728 STUB1Q9UNE7 303 aa11.1□□□□□ -0.63
PAF1-202ENST00000416728 CASQ2O14958 399 aaPredicted RBP11.09□□□□□ -0.63
PAF1-202ENST00000416728 SLC25A17O43808 307 aa11.09□□□□□ -0.63
PAF1-202ENST00000416728 SNRPBP14678 240 aaKnown RBP11.09□□□□□ -0.63
PAF1-202ENST00000416728 FXYD3Q14802 87 aa11.09□□□□□ -0.63
PAF1-202ENST00000416728 HAPLN4Q86UW8 402 aa11.09□□□□□ -0.63
PAF1-202ENST00000416728 ANKRD13BQ86YJ7 626 aa11.09□□□□□ -0.63
PAF1-202ENST00000416728 POC5Q8NA72 575 aa11.09□□□□□ -0.63
PAF1-202ENST00000416728 ARHGAP5-AS1Q96IT6 56 aa11.09□□□□□ -0.63
PAF1-202ENST00000416728 CMSS1Q9BQ75 279 aaKnown RBP11.09□□□□□ -0.63
PAF1-202ENST00000416728 RSRP1Q9BUV0 290 aa11.09□□□□□ -0.63
PAF1-202ENST00000416728 SCN3BQ9NY72 215 aa11.09□□□□□ -0.63
PAF1-202ENST00000416728 C13orf42A0A1B0GVH6 325 aa11.08□□□□□ -0.64
PAF1-202ENST00000416728 FOXI3A8MTJ6 420 aaPredicted RBP11.08□□□□□ -0.64
PAF1-202ENST00000416728 M0R1X1 148 aa11.08□□□□□ -0.64
PAF1-202ENST00000416728 ARL6IP5O75915 188 aa11.08□□□□□ -0.64
PAF1-202ENST00000416728 CNIH1O95406 144 aa11.08□□□□□ -0.64
PAF1-202ENST00000416728 LYL1P12980 280 aa11.08□□□□□ -0.64
PAF1-202ENST00000416728 ZP3P21754 424 aa11.08□□□□□ -0.64
PAF1-202ENST00000416728 VEGFCP49767 419 aa11.08□□□□□ -0.64
PAF1-202ENST00000416728 TMEM50BP56557 158 aa11.08□□□□□ -0.64
PAF1-202ENST00000416728 LINC00205P59089 165 aa11.08□□□□□ -0.64
PAF1-202ENST00000416728 RAB11BQ15907 218 aa11.08□□□□□ -0.64
PAF1-202ENST00000416728 GFI1Q99684 422 aa11.08□□□□□ -0.64
PAF1-202ENST00000416728 PECRQ9BY49 303 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms