RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 OR5B12Q96R08 314 aa11.74□□□□□ -0.53
UBXN4-203ENST00000416538 MCRIP2Q9BUT9 160 aaKnown RBP11.74□□□□□ -0.53
UBXN4-203ENST00000416538 VCX3BQ9H321 246 aa11.74□□□□□ -0.53
UBXN4-203ENST00000416538 ACOT13Q9NPJ3 140 aa11.74□□□□□ -0.53
UBXN4-203ENST00000416538 TPSG1Q9NRR2 321 aa11.74□□□□□ -0.53
UBXN4-203ENST00000416538 NDUFB11Q9NX14 153 aa11.74□□□□□ -0.53
UBXN4-203ENST00000416538 V9GY05 133 aa11.74□□□□□ -0.53
UBXN4-203ENST00000416538 TRAV41A0A0B4J266 112 aa11.73□□□□□ -0.53
UBXN4-203ENST00000416538 OR5H14A6NHG9 310 aa11.73□□□□□ -0.53
UBXN4-203ENST00000416538 I3L521 148 aa11.73□□□□□ -0.53
UBXN4-203ENST00000416538 RRHO14718 337 aa11.73□□□□□ -0.53
UBXN4-203ENST00000416538 CD3GP09693 182 aa11.73□□□□□ -0.53
UBXN4-203ENST00000416538 CRIP2P52943 208 aaPredicted RBP11.73□□□□□ -0.53
UBXN4-203ENST00000416538 ECSCRQ19T08 205 aa11.73□□□□□ -0.53
UBXN4-203ENST00000416538 CD200R1LQ6Q8B3 271 aa11.73□□□□□ -0.53
UBXN4-203ENST00000416538 ZNF383Q8NA42 475 aa11.73□□□□□ -0.53
UBXN4-203ENST00000416538 MINDY2Q8NBR6 621 aa11.73□□□□□ -0.53
UBXN4-203ENST00000416538 DPF1Q92782 380 aa11.73□□□□□ -0.53
UBXN4-203ENST00000416538 PTX4Q96A99 478 aa11.73□□□□□ -0.53
UBXN4-203ENST00000416538 CMSS1Q9BQ75 279 aaKnown RBP11.73□□□□□ -0.53
UBXN4-203ENST00000416538 GPR61Q9BZJ8 451 aa11.73□□□□□ -0.53
UBXN4-203ENST00000416538 ALX4Q9H161 411 aaPredicted RBP11.73□□□□□ -0.53
UBXN4-203ENST00000416538 RIMS4Q9H426 269 aaPredicted RBP11.73□□□□□ -0.53
UBXN4-203ENST00000416538 SCOCQ9UIL1 159 aa11.73□□□□□ -0.53
UBXN4-203ENST00000416538 RNF150Q9ULK6 438 aa11.73□□□□□ -0.53
UBXN4-203ENST00000416538 SMIM30A4D0T7 59 aa11.72□□□□□ -0.53
UBXN4-203ENST00000416538 MFNGO00587 321 aa11.72□□□□□ -0.53
UBXN4-203ENST00000416538 DENRO43583 198 aaKnown RBP11.72□□□□□ -0.53
UBXN4-203ENST00000416538 IGKV1-16P04430 117 aa11.72□□□□□ -0.53
UBXN4-203ENST00000416538 OR5H8P0DN80 308 aa11.72□□□□□ -0.53
UBXN4-203ENST00000416538 CEACAM6P40199 344 aa11.72□□□□□ -0.53
UBXN4-203ENST00000416538 CX3CL1P78423 397 aa11.72□□□□□ -0.53
UBXN4-203ENST00000416538 SSBP2P81877 361 aaPredicted RBP11.72□□□□□ -0.53
UBXN4-203ENST00000416538 LIN54Q6MZP7 749 aa11.72□□□□□ -0.53
UBXN4-203ENST00000416538 OR11H1Q8NG94 326 aa11.72□□□□□ -0.53
UBXN4-203ENST00000416538 MAFIPQ8WZ33 124 aa11.72□□□□□ -0.53
UBXN4-203ENST00000416538 PRR25Q96S07 402 aa11.72□□□□□ -0.53
UBXN4-203ENST00000416538 FAM103A1Q9BTL3 118 aaKnown RBP11.72□□□□□ -0.53
UBXN4-203ENST00000416538 RDH8Q9NYR8 311 aa11.72□□□□□ -0.53
UBXN4-203ENST00000416538 WASHC3Q9Y3C0 194 aa11.72□□□□□ -0.53
UBXN4-203ENST00000416538 RAB27BO00194 218 aa11.71□□□□□ -0.53
UBXN4-203ENST00000416538 FCGR3AP08637 254 aa11.71□□□□□ -0.53
UBXN4-203ENST00000416538 ZBTB25P24278 435 aa11.71□□□□□ -0.53
UBXN4-203ENST00000416538 DGCR2P98153 550 aa11.71□□□□□ -0.53
UBXN4-203ENST00000416538 RUNX1Q01196 453 aa11.71□□□□□ -0.53
UBXN4-203ENST00000416538 IGSF11Q5DX21 431 aa11.71□□□□□ -0.53
UBXN4-203ENST00000416538 DEFB121Q5J5C9 76 aa11.71□□□□□ -0.53
UBXN4-203ENST00000416538 OR56B1Q8NGI3 324 aa11.71□□□□□ -0.53
UBXN4-203ENST00000416538 OR5M8Q8NGP6 311 aa11.71□□□□□ -0.53
UBXN4-203ENST00000416538 UBE2E2Q96LR5 201 aa11.71□□□□□ -0.53
UBXN4-203ENST00000416538 CABLES2Q9BTV7 478 aa11.71□□□□□ -0.53
UBXN4-203ENST00000416538 KIAA1456Q9P272 454 aa11.71□□□□□ -0.53
UBXN4-203ENST00000416538 ELF5Q9UKW6 265 aaPredicted RBP11.71□□□□□ -0.53
UBXN4-203ENST00000416538 A3GALT2U3KPV4 340 aa11.71□□□□□ -0.53
UBXN4-203ENST00000416538 IGKV1D-8A0A087WSZ0 117 aa11.7□□□□□ -0.54
UBXN4-203ENST00000416538 TRAV1-2A0A0B4J238 106 aa11.7□□□□□ -0.54
UBXN4-203ENST00000416538 A0A1W2PN81 502 aa11.7□□□□□ -0.54
UBXN4-203ENST00000416538 IFITM5A6NNB3 132 aa11.7□□□□□ -0.54
UBXN4-203ENST00000416538 SEC14L6B5MCN3 397 aa11.7□□□□□ -0.54
UBXN4-203ENST00000416538 H7C2Y5 167 aa11.7□□□□□ -0.54
UBXN4-203ENST00000416538 HSPA12AO43301 675 aa11.7□□□□□ -0.54
UBXN4-203ENST00000416538 CHRNA7P36544 502 aa11.7□□□□□ -0.54
UBXN4-203ENST00000416538 HSPA13P48723 471 aa11.7□□□□□ -0.54
UBXN4-203ENST00000416538 RAB9AP51151 201 aa11.7□□□□□ -0.54
UBXN4-203ENST00000416538 PSG5Q15238 335 aa11.7□□□□□ -0.54
UBXN4-203ENST00000416538 EDARADDQ8WWZ3 215 aa11.7□□□□□ -0.54
UBXN4-203ENST00000416538 B9D2Q9BPU9 175 aa11.7□□□□□ -0.54
UBXN4-203ENST00000416538 CHCHD6Q9BRQ6 235 aa11.7□□□□□ -0.54
UBXN4-203ENST00000416538 ZNF230Q9UIE0 474 aaPredicted RBP11.7□□□□□ -0.54
UBXN4-203ENST00000416538 TRDV1A0A1B0GX56 115 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 TRDCB7Z8K6 153 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 FABP7O15540 132 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 GSTT2P0CG29 244 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 GSTT2BP0CG30 244 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 GNB3P16520 340 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 C9orf66Q5T8R8 295 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 C22orf42Q6IC83 251 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 RAB3CQ96E17 227 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 CLCC1Q96S66 551 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 TOLLIPQ9H0E2 274 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 METTL1Q9UBP6 276 aaKnown RBP11.69□□□□□ -0.54
UBXN4-203ENST00000416538 RAB22AQ9UL26 194 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 RAB26Q9ULW5 256 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 MGAT4AQ9UM21 535 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 FOXA2Q9Y261 457 aaPredicted RBP11.69□□□□□ -0.54
UBXN4-203ENST00000416538 VSIG4Q9Y279 399 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 LSM4Q9Y4Z0 139 aaKnown RBP11.69□□□□□ -0.54
UBXN4-203ENST00000416538 NUBP2Q9Y5Y2 271 aa11.69□□□□□ -0.54
UBXN4-203ENST00000416538 A0A075B6Q4 140 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 M0R1X1 148 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 ARPC1BO15143 372 aaKnown RBP11.68□□□□□ -0.54
UBXN4-203ENST00000416538 RBBP9O75884 186 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 ATP6V1G2O95670 118 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 CA2P00918 260 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 IGLV2-23P01705 113 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 GSTP1P09211 210 aaKnown RBP11.68□□□□□ -0.54
UBXN4-203ENST00000416538 HIST1H1DP16402 221 aaKnown RBP11.68□□□□□ -0.54
UBXN4-203ENST00000416538 SLURP1P55000 103 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 GABARAPL2P60520 117 aa11.68□□□□□ -0.54
UBXN4-203ENST00000416538 ZNF616Q08AN1 781 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms