RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 GZMHP20718 246 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 ZP3P21754 424 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 HIST1H1TP22492 207 aaPredicted RBP1.9□□□□□ -2.11
MCF2-204ENST00000414978 PEBP1P30086 187 aaKnown RBP1.9□□□□□ -2.11
MCF2-204ENST00000414978 EFNA3P52797 238 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 HBA1P69905 142 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 SLC35A1P78382 337 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 GLO1Q04760 184 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 DNM1P34Q6PK57 102 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 AKAP14Q86UN6 197 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 CALHM3Q86XJ0 350 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 Q8N9W7 124 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 C20orf203Q8NBC4 194 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 SLC37A2Q8TED4 501 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 PATE1Q8WXA2 126 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 EXOSC8Q96B26 276 aaKnown RBP1.9□□□□□ -2.11
MCF2-204ENST00000414978 MS4A6EQ96DS6 147 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 SAV1Q9H4B6 383 aaPredicted RBP1.9□□□□□ -2.11
MCF2-204ENST00000414978 C8orf4Q9NR00 106 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 BABAM2Q9NXR7 383 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 VPREB3Q9UKI3 123 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 CES1P1Q9UKY3 287 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 TP53TG1Q9Y2A0 90 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 DNAH3Q8TD57 4116 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 ANKHD1Q8IWZ3 2542 aaKnown RBP1.9□□□□□ -2.11
MCF2-204ENST00000414978 A0A0J9YY10 115 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 C5orf58C9J3I9 102 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 LRRN3E7EW58 273 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 H0YJX3 145 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 IFNA14P01570 189 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 IGHV3-13P01766 116 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 TGFBR1P36897 503 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 CCR6P51684 374 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 RAB8AP61006 207 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 BTN3A2P78410 334 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 GUSBP1Q15486 140 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 OR2B11Q5JQS5 317 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 KLF17Q5JT82 389 aaPredicted RBP1.9□□□□□ -2.11
MCF2-204ENST00000414978 FBXW9Q5XUX1 488 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 C16orf47Q6ZP98 133 aaPredicted RBP1.9□□□□□ -2.11
MCF2-204ENST00000414978 FAM19A5Q7Z5A7 132 aaPredicted RBP1.9□□□□□ -2.11
MCF2-204ENST00000414978 CEND1Q8N111 149 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 Q8N377 158 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 PACRGLQ8N7B6 248 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 OR52E4Q8NGH9 312 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 OR5AK3PQ8NH89 298 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 ZFP90Q8TF47 636 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 NEURL3Q96EH8 262 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 PYURFQ96I23 114 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 FAM210BQ96KR6 192 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 TMEM56Q96MV1 263 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 ARHGDIGQ99819 225 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 ZNF717Q9BY31 904 aaPredicted RBP1.9□□□□□ -2.11
MCF2-204ENST00000414978 BATF3Q9NR55 127 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 RAB26Q9ULW5 256 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 PSG11Q9UQ72 335 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 C14orf166Q9Y224 244 aaKnown RBP1.9□□□□□ -2.11
MCF2-204ENST00000414978 ANGPT4Q9Y264 503 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 MDC1Q14676 2089 aaKnown RBP1.89□□□□□ -2.11
MCF2-204ENST00000414978 SNRNP200O75643 2136 aaKnown RBP1.89□□□□□ -2.11
MCF2-204ENST00000414978 CCRL2O00421 344 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 SERPINB7O75635 380 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 THY1P04216 161 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 IL1RNP18510 177 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 OPRM1P35372 400 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 GZMMP51124 257 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 DLX1P56177 255 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 DEFA1P59665 94 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 OR2B8PP59922 312 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 ST3GAL4Q11206 333 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 RBM48Q5RL73 367 aaKnown RBP1.89□□□□□ -2.11
MCF2-204ENST00000414978 C6orf52Q5T4I8 152 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 WDFY1Q8IWB7 410 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 C11orf53Q8IXP5 236 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 GAPTQ8N292 157 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 C10orf111Q8N326 155 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 TMEM86BQ8N661 226 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 NT5CQ8TCD5 201 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 CASTOR1Q8WTX7 329 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 LZICQ8WZA0 190 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 UCN3Q969E3 161 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 FAM104AQ969W3 186 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 CNBD2Q96M20 576 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 HIST1H4GQ99525 98 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 KRTAP9-9Q9BYP9 154 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 KRTAP9-4Q9BYQ2 154 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 DEFB126Q9BYW3 111 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 BARHL1Q9BZE3 327 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 TLNRD1Q9H1K6 362 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 ZNF780BQ9Y6R6 833 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 BOD1L1Q8NFC6 3051 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 SETD2Q9BYW2 2564 aaPredicted RBP1.89□□□□□ -2.11
MCF2-204ENST00000414978 IGHV3-35A0A0C4DH35 117 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 C9J4A7 227 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 G3V2T6 193 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 H0YGG7 62 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 H7C423 109 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 DENRO43583 198 aaKnown RBP1.89□□□□□ -2.11
MCF2-204ENST00000414978 IFNA5P01569 189 aa1.89□□□□□ -2.11
MCF2-204ENST00000414978 RLN2P04090 185 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms