RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 ZANQ9Y493 2812 aa11.57□□□□□ -0.56
SF3B1-204ENST00000414963 AKAP9Q99996 3911 aa11.57□□□□□ -0.56
SF3B1-204ENST00000414963 CENPVL3A0A0U1RRI6 287 aa11.57□□□□□ -0.56
SF3B1-204ENST00000414963 CRYM-AS1A6NIL9 109 aa11.57□□□□□ -0.56
SF3B1-204ENST00000414963 B3GALNT1O75752 331 aa11.57□□□□□ -0.56
SF3B1-204ENST00000414963 ARG1P05089 322 aa11.57□□□□□ -0.56
SF3B1-204ENST00000414963 HTR1DP28221 377 aa11.57□□□□□ -0.56
SF3B1-204ENST00000414963 PRB3Q04118 309 aaPredicted RBP11.57□□□□□ -0.56
SF3B1-204ENST00000414963 KLRD1Q13241 179 aa11.57□□□□□ -0.56
SF3B1-204ENST00000414963 PHLDA2Q53GA4 152 aa11.57□□□□□ -0.56
SF3B1-204ENST00000414963 C1orf229Q6ZS94 237 aaPredicted RBP11.57□□□□□ -0.56
SF3B1-204ENST00000414963 RTN4IP1Q8WWV3 396 aaPredicted RBP11.57□□□□□ -0.56
SF3B1-204ENST00000414963 LHX4Q969G2 390 aa11.57□□□□□ -0.56
SF3B1-204ENST00000414963 S1PR3Q99500 378 aa11.57□□□□□ -0.56
SF3B1-204ENST00000414963 DPM3Q9P2X0 92 aa11.57□□□□□ -0.56
SF3B1-204ENST00000414963 IGHV1-69DA0A0B4J2H0 117 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 C7orf66A4D0T2 115 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 RNF212BA8MTL3 300 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 LEUTXA8MZ59 168 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 SMAD7O15105 426 aaKnown RBP11.56□□□□□ -0.56
SF3B1-204ENST00000414963 AVPP01185 164 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 IGHV1-69P01742 117 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 OR4E1P0C645 316 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 ZNF16P17020 682 aaPredicted RBP11.56□□□□□ -0.56
SF3B1-204ENST00000414963 AKR1C4P17516 323 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 CEACAM3P40198 252 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 RAB25P57735 213 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 SUPT4H1P63272 117 aaKnown RBP11.56□□□□□ -0.56
SF3B1-204ENST00000414963 KRTAP1-1Q07627 177 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 RPL39P5Q59GN2 51 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 C11orf88Q6PI97 169 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 GLDNQ6ZMI3 551 aaPredicted RBP11.56□□□□□ -0.56
SF3B1-204ENST00000414963 TBC1D26Q86UD7 250 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 SGPP2Q8IWX5 399 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 TCTEX1D1Q8N7M0 179 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 GALNT14Q96FL9 552 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 ADTRPQ96IZ2 230 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 NAA60Q9H7X0 242 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 FAM212BQ9NTI7 297 aaPredicted RBP11.56□□□□□ -0.56
SF3B1-204ENST00000414963 TBL2Q9Y4P3 447 aaKnown RBP11.56□□□□□ -0.56
SF3B1-204ENST00000414963 SETXQ7Z333 2677 aaKnown RBP11.56□□□□□ -0.56
SF3B1-204ENST00000414963 WNK2Q9Y3S1 2297 aa11.56□□□□□ -0.56
SF3B1-204ENST00000414963 A0A0B4J293 547 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 TEX13DA0A0J9YY54 714 aaPredicted RBP11.55□□□□□ -0.56
SF3B1-204ENST00000414963 C9orf170A2RU37 121 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 SNRPGP15A8MWD9 76 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 OOSP1A8MZH6 123 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 M0R1X1 148 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 CD5LO43866 347 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 F2RP25116 425 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 DUTP33316 252 aaKnown RBP11.55□□□□□ -0.56
SF3B1-204ENST00000414963 BPIFB3P59826 476 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 ZNF816Q0VGE8 651 aaPredicted RBP11.55□□□□□ -0.56
SF3B1-204ENST00000414963 PPP1R1AQ13522 171 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 TATDN3Q17R31 274 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 LDLRAD2Q5SZI1 272 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 LYG2Q86SG7 212 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 CAPSLQ8WWF8 208 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 AJUBAQ96IF1 538 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 C18orf12Q96KH6 178 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 KCNIP3Q9Y2W7 256 aa11.55□□□□□ -0.56
SF3B1-204ENST00000414963 TEX15Q9BXT5 2789 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 C3orf85A0A1B0GTC6 90 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 H0Y980 276 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 NPFFO15130 113 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 TXNL1O43396 289 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 TNFSF12O43508 249 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 SFT2D2O95562 160 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 DUS4LO95620 317 aaKnown RBP11.54□□□□□ -0.56
SF3B1-204ENST00000414963 FSHBP01225 129 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 GAPDHP04406 335 aaKnown RBP11.54□□□□□ -0.56
SF3B1-204ENST00000414963 CT45A6P0DMU7 189 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 CT45A5P0DMU8 189 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 CT45A7P0DMV0 189 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 FOSL1P15407 271 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 THBS3P49746 956 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 RPL30P62888 115 aaKnown RBP11.54□□□□□ -0.56
SF3B1-204ENST00000414963 TAGLNQ01995 201 aaKnown RBP11.54□□□□□ -0.56
SF3B1-204ENST00000414963 DHRS2Q13268 280 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 C4orf46Q504U0 113 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 KLF17Q5JT82 389 aaPredicted RBP11.54□□□□□ -0.56
SF3B1-204ENST00000414963 TPTE2P1Q5T6R2 138 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 GPR157Q5UAW9 335 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 TEX29Q8N6K0 151 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 ZNF431Q8TF32 576 aaPredicted RBP11.54□□□□□ -0.56
SF3B1-204ENST00000414963 DDB2Q92466 427 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 MALSU1Q96EH3 234 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 BEX2Q9BXY8 128 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 BEX1Q9HBH7 125 aa11.54□□□□□ -0.56
SF3B1-204ENST00000414963 GPN1Q9HCN4 374 aaPredicted RBP11.54□□□□□ -0.56
SF3B1-204ENST00000414963 ABCA1O95477 2261 aa11.53□□□□□ -0.56
SF3B1-204ENST00000414963 A0A0A6YYJ9 748 aa11.53□□□□□ -0.56
SF3B1-204ENST00000414963 A0A0B4J2A0 478 aa11.53□□□□□ -0.56
SF3B1-204ENST00000414963 LINC00473A8K010 186 aa11.53□□□□□ -0.56
SF3B1-204ENST00000414963 RBFOX2O43251 390 aaKnown RBP eCLIP11.53□□□□□ -0.563e-10■■□□□ 14.1
SF3B1-204ENST00000414963 IFNA2P01563 188 aa11.53□□□□□ -0.56
SF3B1-204ENST00000414963 EPHA1P21709 976 aa11.53□□□□□ -0.56
SF3B1-204ENST00000414963 SAA4P35542 130 aa11.53□□□□□ -0.56
SF3B1-204ENST00000414963 LGALS4P56470 323 aa11.53□□□□□ -0.56
SF3B1-204ENST00000414963 CATR1Q13166 79 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms