RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.01■□□□□ 0.15
SHANK3-202ENST00000414786 FAM209BQ5JX69 171 aa16.01■□□□□ 0.15
SHANK3-202ENST00000414786 CBLN2Q8IUK8 224 aa16.01■□□□□ 0.15
SHANK3-202ENST00000414786 FAM89BQ8N5H3 189 aa16.01■□□□□ 0.15
SHANK3-202ENST00000414786 CALYQ9NYX4 217 aa16.01■□□□□ 0.15
SHANK3-202ENST00000414786 MRM2Q9UI43 246 aaKnown RBP16.01■□□□□ 0.15
SHANK3-202ENST00000414786 RAB33BQ9H082 229 aa16■□□□□ 0.15
SHANK3-202ENST00000414786 REC114Q7Z4M0 266 aa16■□□□□ 0.15
SHANK3-202ENST00000414786 VAX2Q9UIW0 290 aa16■□□□□ 0.15
SHANK3-202ENST00000414786 NDUFB4O95168 129 aa16■□□□□ 0.15
SHANK3-202ENST00000414786 SRSF7Q16629 238 aaKnown RBP eCLIP16■□□□□ 0.153e-8■■■□□ 18
SHANK3-202ENST00000414786 PCSK4Q6UW60 755 aa16■□□□□ 0.15
SHANK3-202ENST00000414786 ALG14Q96F25 216 aa16■□□□□ 0.15
SHANK3-202ENST00000414786 SHISA5Q8N114 240 aa16■□□□□ 0.15
SHANK3-202ENST00000414786 RNF115Q9Y4L5 304 aa16■□□□□ 0.15
SHANK3-202ENST00000414786 DICER1Q9UPY3 1922 aaKnown RBP16■□□□□ 0.15
SHANK3-202ENST00000414786 CDKN1AP38936 164 aa16■□□□□ 0.15
SHANK3-202ENST00000414786 YIPF6Q96EC8 236 aa16■□□□□ 0.15
SHANK3-202ENST00000414786 MAP1LC3AQ9H492 121 aa16■□□□□ 0.15
SHANK3-202ENST00000414786 RGPD5Q99666 1765 aa16■□□□□ 0.15
SHANK3-202ENST00000414786 CDK2AP2O75956 126 aa16■□□□□ 0.15
SHANK3-202ENST00000414786 ISXQ2M1V0 245 aa16■□□□□ 0.15
SHANK3-202ENST00000414786 GP1BAP07359 652 aa15.99■□□□□ 0.15
SHANK3-202ENST00000414786 LY6DQ14210 128 aa15.99■□□□□ 0.15
SHANK3-202ENST00000414786 OR4D5Q8NGN0 318 aa15.99■□□□□ 0.15
SHANK3-202ENST00000414786 NPPCP23582 126 aa15.99■□□□□ 0.15
SHANK3-202ENST00000414786 A0A0U1RQV5 110 aa15.99■□□□□ 0.15
SHANK3-202ENST00000414786 SPATA45Q537H7 98 aa15.99■□□□□ 0.15
SHANK3-202ENST00000414786 RFLNBQ8N5W9 214 aa15.99■□□□□ 0.15
SHANK3-202ENST00000414786 SPSB4Q96A44 273 aa15.99■□□□□ 0.15
SHANK3-202ENST00000414786 CDC20Q12834 499 aa15.99■□□□□ 0.15
SHANK3-202ENST00000414786 ACSF3Q4G176 576 aaPredicted RBP15.98■□□□□ 0.15
SHANK3-202ENST00000414786 C10orf126Q8N4M7 172 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 J3QT63 122 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 MIC13Q5XKP0 118 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 STHQ8IWL8 128 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 EEF1AKMT3Q96AZ1 226 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 ST6GAL2Q96JF0 529 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 TRAV8-6A0A0B4J262 113 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 SCNM1Q9BWG6 230 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 PIKFYVEQ9Y2I7 2098 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 NPC2P61916 151 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 AKAP12Q02952 1782 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 MIA3Q5JRA6 1907 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 IL4P05112 153 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 IBA57Q5T440 356 aaKnown RBP15.98■□□□□ 0.15
SHANK3-202ENST00000414786 CDCP2Q5VXM1 449 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 SCTP09683 121 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 ZP3P21754 424 aa15.98■□□□□ 0.15
SHANK3-202ENST00000414786 DRD3P35462 400 aa15.97■□□□□ 0.15
SHANK3-202ENST00000414786 TRBV20OR9-2A0A075B6H5 130 aa15.97■□□□□ 0.15
SHANK3-202ENST00000414786 NUTF2P61970 127 aaKnown RBP15.97■□□□□ 0.15
SHANK3-202ENST00000414786 STPG3Q8N7X2 389 aa15.97■□□□□ 0.15
SHANK3-202ENST00000414786 SPINT1O43278 529 aa15.97■□□□□ 0.15
SHANK3-202ENST00000414786 HSPB9Q9BQS6 159 aa15.97■□□□□ 0.15
SHANK3-202ENST00000414786 MRPS16Q9Y3D3 137 aaKnown RBP15.97■□□□□ 0.15
SHANK3-202ENST00000414786 LRP6O75581 1613 aa15.97■□□□□ 0.15
SHANK3-202ENST00000414786 CHAC2Q8WUX2 184 aa15.97■□□□□ 0.15
SHANK3-202ENST00000414786 RBKSQ9H477 322 aa15.97■□□□□ 0.15
SHANK3-202ENST00000414786 MTFP1Q9UDX5 166 aa15.97■□□□□ 0.15
SHANK3-202ENST00000414786 CD24P25063 80 aa15.97■□□□□ 0.15
SHANK3-202ENST00000414786 CLEC19AQ6UXS0 136 aa15.97■□□□□ 0.15
SHANK3-202ENST00000414786 TAF1P21675 1872 aa15.96■□□□□ 0.15
SHANK3-202ENST00000414786 ZAR1Q86SH2 424 aa15.96■□□□□ 0.15
SHANK3-202ENST00000414786 MRPL30Q8TCC3 161 aaKnown RBP15.96■□□□□ 0.15
SHANK3-202ENST00000414786 OR2H2O95918 312 aa15.96■□□□□ 0.15
SHANK3-202ENST00000414786 RIMKLAQ8IXN7 391 aa15.96■□□□□ 0.15
SHANK3-202ENST00000414786 C7orf69Q9H7B7 122 aa15.96■□□□□ 0.15
SHANK3-202ENST00000414786 GOLT1AQ6ZVE7 132 aa15.96■□□□□ 0.15
SHANK3-202ENST00000414786 BIVMQ86UB2 503 aa15.96■□□□□ 0.15
SHANK3-202ENST00000414786 IGHV3-64A0A075B6Q5 118 aa15.96■□□□□ 0.15
SHANK3-202ENST00000414786 H3BQ15 152 aa15.96■□□□□ 0.15
SHANK3-202ENST00000414786 CXCL10P02778 98 aa15.96■□□□□ 0.15
SHANK3-202ENST00000414786 LAMA4Q16363 1823 aa15.96■□□□□ 0.15
SHANK3-202ENST00000414786 ZFC3H1O60293 1989 aaKnown RBP15.96■□□□□ 0.15
SHANK3-202ENST00000414786 ZNFX1Q9P2E3 1918 aaKnown RBP15.96■□□□□ 0.15
SHANK3-202ENST00000414786 IGHV1-69-2A0A0G2JMI3 117 aa15.96■□□□□ 0.14
SHANK3-202ENST00000414786 CRPP02741 224 aa15.96■□□□□ 0.14
SHANK3-202ENST00000414786 RAB9AP51151 201 aa15.96■□□□□ 0.14
SHANK3-202ENST00000414786 FAM201AQ5SY85 155 aa15.96■□□□□ 0.14
SHANK3-202ENST00000414786 CHRNA10Q9GZZ6 450 aa15.96■□□□□ 0.14
SHANK3-202ENST00000414786 TMEM210A6NLX4 147 aa15.96■□□□□ 0.14
SHANK3-202ENST00000414786 RPL36A-HNRNPH2H7BZ11 118 aa15.96■□□□□ 0.14
SHANK3-202ENST00000414786 NDUFA3O95167 84 aa15.96■□□□□ 0.14
SHANK3-202ENST00000414786 PGA4P0DJD7 388 aa15.96■□□□□ 0.14
SHANK3-202ENST00000414786 PGA5P0DJD9 388 aa15.96■□□□□ 0.14
SHANK3-202ENST00000414786 P2RY1P47900 373 aa15.96■□□□□ 0.14
SHANK3-202ENST00000414786 ZNF506Q5JVG8 444 aa15.96■□□□□ 0.14
SHANK3-202ENST00000414786 CLEC7AQ9BXN2 247 aa15.96■□□□□ 0.14
SHANK3-202ENST00000414786 IGHV4-39P01824 125 aa15.95■□□□□ 0.14
SHANK3-202ENST00000414786 ZP4Q12836 540 aa15.95■□□□□ 0.14
SHANK3-202ENST00000414786 RPL8P62917 257 aaKnown RBP15.95■□□□□ 0.14
SHANK3-202ENST00000414786 SSBP1Q04837 148 aaKnown RBP15.95■□□□□ 0.14
SHANK3-202ENST00000414786 C10orf128Q5T292 105 aa15.95■□□□□ 0.14
SHANK3-202ENST00000414786 GALNT14Q96FL9 552 aa15.95■□□□□ 0.14
SHANK3-202ENST00000414786 UNC13CQ8NB66 2214 aa15.95■□□□□ 0.14
SHANK3-202ENST00000414786 IL20Q9NYY1 176 aa15.95■□□□□ 0.14
SHANK3-202ENST00000414786 S1PR2O95136 353 aa15.95■□□□□ 0.14
SHANK3-202ENST00000414786 FABP2P12104 132 aa15.95■□□□□ 0.14
SHANK3-202ENST00000414786 ASCL4Q6XD76 172 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms