RNA–Protein interactions for RNA: ENST00000413971.5

TOP2B-202, Transcript of DNA topoisomerase II beta, humanhuman

TSL 5

Gene TOP2B, Length 2,049 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-202ENST00000413971 C1orf147Q96MC9 270 aaPredicted RBP3.2□□□□□ -1.9
TOP2B-202ENST00000413971 SLC22A4Q9H015 551 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 RPUSD1Q9UJJ7 312 aaKnown RBP3.2□□□□□ -1.9
TOP2B-202ENST00000413971 SLC7A11Q9UPY5 501 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 ORC6Q9Y5N6 252 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 ARL5AQ9Y689 179 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 MED12LQ86YW9 2145 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 NCKAP5O14513 1909 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 NINQ8N4C6 2090 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 CIB4A0PJX0 185 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 RBFOX3A6NFN3 312 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 PMS2P5A8MQ11 134 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 H0YGG7 62 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 TAAR5O14804 337 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 SLC35G6P0C7Q6 338 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 CCL3P10147 92 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 CBR1P16152 277 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 F2RP25116 425 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 SDC4P31431 198 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 BAXQ07812 192 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 IZUMO4Q1ZYL8 232 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 NHLRC3Q5JS37 347 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 SCIMPQ6UWF3 145 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 OAFQ86UD1 273 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 COMMD7Q86VX2 200 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 SIGLECL1Q8N7X8 197 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 LINC01555Q8NAE3 123 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 C11orf72Q8NBR9 251 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 LMO3Q8TAP4 145 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 ZNF597Q96LX8 424 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 RDH12Q96NR8 316 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 GABARAPL3Q9BY60 117 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 EDA2RQ9HAV5 297 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 RHOFQ9HBH0 211 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 BOKQ9UMX3 212 aaPredicted RBP3.2□□□□□ -1.9
TOP2B-202ENST00000413971 C14orf166Q9Y224 244 aaKnown RBP3.2□□□□□ -1.9
TOP2B-202ENST00000413971 SLC25A15Q9Y619 301 aa3.2□□□□□ -1.9
TOP2B-202ENST00000413971 TRAV9-2A0A087WT02 112 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 SHISA9B4DS77 424 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 MFNGO00587 321 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 UBDO15205 165 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 PIRTP0C851 137 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 UCHL3P15374 230 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 RCC1P18754 421 aaPredicted RBP3.19□□□□□ -1.9
TOP2B-202ENST00000413971 SSTR5P35346 364 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 ERFP50548 548 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 RPS23P62266 143 aaKnown RBP3.19□□□□□ -1.9
TOP2B-202ENST00000413971 S100A12P80511 92 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 FMODQ06828 376 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 LRRC36Q1X8D7 754 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 ZCWPW2Q504Y3 356 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 YIF1BQ5BJH7 314 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 C1orf146Q5VVC0 180 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 METTL21CQ5VZV1 264 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 FAM131AQ6UXB0 335 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 SLC51BQ86UW2 128 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 GATD1Q8NB37 220 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 GPR32P1Q8NGA4 272 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 OR51S1Q8NGJ8 323 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 OR2V1Q8NHB1 315 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 MRGPRDQ8TDS7 321 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 BLNKQ8WV28 456 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 RASSF5Q8WWW0 418 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 GEMIN6Q8WXD5 167 aaKnown RBP3.19□□□□□ -1.9
TOP2B-202ENST00000413971 RPUSD4Q96CM3 377 aaKnown RBP3.19□□□□□ -1.9
TOP2B-202ENST00000413971 RNF185Q96GF1 192 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 PHB2Q99623 299 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 TLNRD1Q9H1K6 362 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 OR51I1Q9H343 314 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 MYOZ1Q9NP98 299 aaPredicted RBP3.19□□□□□ -1.9
TOP2B-202ENST00000413971 C19orf12Q9NSK7 152 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 VNN3Q9NY84 501 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 DHRS4-AS1Q9P1J3 65 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 PAK5Q9P286 719 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 ZNF223Q9UK11 482 aaPredicted RBP3.19□□□□□ -1.9
TOP2B-202ENST00000413971 RAB22AQ9UL26 194 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 RAB26Q9ULW5 256 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.19□□□□□ -1.9
TOP2B-202ENST00000413971 SLC22A7Q9Y694 548 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 CLPSL1A2RUU4 121 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 DPRXA6NFQ7 191 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 DHRS3O75911 302 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 ZFAND5O76080 213 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 HPNP05981 417 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 M6PRP20645 277 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 REG1BP48304 166 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 NCBP2P52298 156 aaKnown RBP eCLIP3.19□□□□□ -1.9
TOP2B-202ENST00000413971 CRYBA4P53673 196 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 FGF8P55075 233 aaPredicted RBP3.19□□□□□ -1.9
TOP2B-202ENST00000413971 CDKN2DP55273 166 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 PRR3P79522 188 aaKnown RBP3.19□□□□□ -1.9
TOP2B-202ENST00000413971 PRDX1Q06830 199 aaKnown RBP3.19□□□□□ -1.9
TOP2B-202ENST00000413971 BSPH1Q075Z2 132 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 BAMBIQ13145 260 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 KIAA0087Q14695 138 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 KDM4DQ6B0I6 523 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 RASSF6Q6ZTQ3 369 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 SMIM29Q86T20 159 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 TMEM61Q8N0U2 210 aa3.19□□□□□ -1.9
TOP2B-202ENST00000413971 LGI3Q8N145 548 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms