RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 UBBP0CG47 229 aa12.79□□□□□ -0.36
MRPL55-220ENST00000411464 TAS2R43P59537 309 aa12.79□□□□□ -0.36
MRPL55-220ENST00000411464 PSG5Q15238 335 aa12.79□□□□□ -0.36
MRPL55-220ENST00000411464 OR5AN1Q8NGI8 311 aa12.79□□□□□ -0.36
MRPL55-220ENST00000411464 SETD6Q8TBK2 473 aa12.79□□□□□ -0.36
MRPL55-220ENST00000411464 ABHD14BQ96IU4 210 aa12.79□□□□□ -0.36
MRPL55-220ENST00000411464 TSNAXQ99598 290 aaKnown RBP12.79□□□□□ -0.36
MRPL55-220ENST00000411464 BIRC6Q9NR09 4857 aa12.79□□□□□ -0.36
MRPL55-220ENST00000411464 ANKRD34BA5PLL1 514 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 JTBO76095 146 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 ATP6V1G2O95670 118 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 CPEP16870 476 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 MAPK3P27361 379 aaPredicted RBP12.78□□□□□ -0.36
MRPL55-220ENST00000411464 RPS16P62249 146 aaKnown RBP12.78□□□□□ -0.36
MRPL55-220ENST00000411464 KLF5Q13887 457 aaPredicted RBP12.78□□□□□ -0.36
MRPL55-220ENST00000411464 FXYD3Q14802 87 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 MOGAT2Q3SYC2 334 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 C6orf201Q7Z4U5 140 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 GTSCR1Q86UQ5 136 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 SVOPQ8N4V2 548 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 ZNF485Q8NCK3 441 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 OR5T1Q8NG75 326 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 OR9G4Q8NGQ1 327 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 GRPEL2Q8TAA5 225 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 THRSPQ92748 146 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 TMED9Q9BVK6 235 aa12.78□□□□□ -0.36
MRPL55-220ENST00000411464 SMPD3Q9NY59 655 aaPredicted RBP12.78□□□□□ -0.36
MRPL55-220ENST00000411464 ITGB1BP1O14713 200 aa12.77□□□□□ -0.37
MRPL55-220ENST00000411464 CNIH1O95406 144 aa12.77□□□□□ -0.37
MRPL55-220ENST00000411464 CELP19835 753 aa12.77□□□□□ -0.37
MRPL55-220ENST00000411464 CEACAM6P40199 344 aa12.77□□□□□ -0.37
MRPL55-220ENST00000411464 RPS27AP62979 156 aaKnown RBP12.77□□□□□ -0.37
MRPL55-220ENST00000411464 OR10K2Q6IF99 312 aa12.77□□□□□ -0.37
MRPL55-220ENST00000411464 MOB1BQ7L9L4 216 aa12.77□□□□□ -0.37
MRPL55-220ENST00000411464 POC5Q8NA72 575 aa12.77□□□□□ -0.37
MRPL55-220ENST00000411464 DRAXINQ8NBI3 349 aaPredicted RBP12.77□□□□□ -0.37
MRPL55-220ENST00000411464 EDARADDQ8WWZ3 215 aa12.77□□□□□ -0.37
MRPL55-220ENST00000411464 AGMATQ9BSE5 352 aa12.77□□□□□ -0.37
MRPL55-220ENST00000411464 PARP12Q9H0J9 701 aaKnown RBP12.77□□□□□ -0.37
MRPL55-220ENST00000411464 H3BUA1 57 aa12.76□□□□□ -0.37
MRPL55-220ENST00000411464 SPDEFO95238 335 aa12.76□□□□□ -0.37
MRPL55-220ENST00000411464 NAPSAO96009 420 aa12.76□□□□□ -0.37
MRPL55-220ENST00000411464 ZBTB25P24278 435 aa12.76□□□□□ -0.37
MRPL55-220ENST00000411464 HTR2CP28335 458 aa12.76□□□□□ -0.37
MRPL55-220ENST00000411464 SYNJ2BPP57105 145 aa12.76□□□□□ -0.37
MRPL55-220ENST00000411464 ST3GAL4Q11206 333 aa12.76□□□□□ -0.37
MRPL55-220ENST00000411464 TATDN3Q17R31 274 aa12.76□□□□□ -0.37
MRPL55-220ENST00000411464 ZNF880Q6PDB4 577 aa12.76□□□□□ -0.37
MRPL55-220ENST00000411464 IL17DQ8TAD2 202 aa12.76□□□□□ -0.37
MRPL55-220ENST00000411464 TMEM59Q9BXS4 323 aa12.76□□□□□ -0.37
MRPL55-220ENST00000411464 C11orf54Q9H0W9 315 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-220ENST00000411464 RIMS4Q9H426 269 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-220ENST00000411464 PLEKHJ1Q9NW61 149 aa12.76□□□□□ -0.37
MRPL55-220ENST00000411464 ZNF221Q9UK13 617 aa12.76□□□□□ -0.37
MRPL55-220ENST00000411464 CASQ2O14958 399 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-220ENST00000411464 IGKV1-16P04430 117 aa12.75□□□□□ -0.37
MRPL55-220ENST00000411464 CD1AP06126 327 aa12.75□□□□□ -0.37
MRPL55-220ENST00000411464 SNRPBP14678 240 aaKnown RBP12.75□□□□□ -0.37
MRPL55-220ENST00000411464 LCN12Q6JVE5 192 aa12.75□□□□□ -0.37
MRPL55-220ENST00000411464 IL34Q6ZMJ4 242 aa12.75□□□□□ -0.37
MRPL55-220ENST00000411464 KCNG3Q8TAE7 436 aa12.75□□□□□ -0.37
MRPL55-220ENST00000411464 GGHQ92820 318 aa12.75□□□□□ -0.37
MRPL55-220ENST00000411464 EFCAB10A6NFE3 127 aa12.74□□□□□ -0.37
MRPL55-220ENST00000411464 SLC25A17O43808 307 aa12.74□□□□□ -0.37
MRPL55-220ENST00000411464 APOA2P02652 100 aa12.74□□□□□ -0.37
MRPL55-220ENST00000411464 AADACP22760 399 aa12.74□□□□□ -0.37
MRPL55-220ENST00000411464 OGFRL1Q5TC84 451 aaPredicted RBP12.74□□□□□ -0.37
MRPL55-220ENST00000411464 GLT8D1Q68CQ7 371 aa12.74□□□□□ -0.37
MRPL55-220ENST00000411464 PDPNQ86YL7 162 aa12.74□□□□□ -0.37
MRPL55-220ENST00000411464 ZNF383Q8NA42 475 aa12.74□□□□□ -0.37
MRPL55-220ENST00000411464 SETD9Q8NE22 299 aa12.74□□□□□ -0.37
MRPL55-220ENST00000411464 CYGBQ8WWM9 190 aa12.74□□□□□ -0.37
MRPL55-220ENST00000411464 TMEM68Q96MH6 324 aa12.74□□□□□ -0.37
MRPL55-220ENST00000411464 OR1A1Q9P1Q5 309 aa12.74□□□□□ -0.37
MRPL55-220ENST00000411464 PEF1Q9UBV8 284 aaKnown RBP12.74□□□□□ -0.37
MRPL55-220ENST00000411464 MYL12BO14950 172 aa12.73□□□□□ -0.37
MRPL55-220ENST00000411464 PROP1O75360 226 aa12.73□□□□□ -0.37
MRPL55-220ENST00000411464 C1orf100Q5SVJ3 147 aa12.73□□□□□ -0.37
MRPL55-220ENST00000411464 TTC23Q5W5X9 447 aa12.73□□□□□ -0.37
MRPL55-220ENST00000411464 Q8N402 240 aa12.73□□□□□ -0.37
MRPL55-220ENST00000411464 NRG4Q8WWG1 115 aa12.73□□□□□ -0.37
MRPL55-220ENST00000411464 PTX4Q96A99 478 aa12.73□□□□□ -0.37
MRPL55-220ENST00000411464 NICN1Q9BSH3 213 aa12.73□□□□□ -0.37
MRPL55-220ENST00000411464 TM2D1Q9BX74 207 aa12.73□□□□□ -0.37
MRPL55-220ENST00000411464 MGAT4AQ9UM21 535 aa12.73□□□□□ -0.37
MRPL55-220ENST00000411464 TRBV6-6A0A0A6YYG2 114 aa12.72□□□□□ -0.37
MRPL55-220ENST00000411464 LGALS7P47929 136 aa12.72□□□□□ -0.37
MRPL55-220ENST00000411464 WNT4P56705 351 aa12.72□□□□□ -0.37
MRPL55-220ENST00000411464 LINC00205P59089 165 aa12.72□□□□□ -0.37
MRPL55-220ENST00000411464 HLA-DRB3P79483 266 aa12.72□□□□□ -0.37
MRPL55-220ENST00000411464 ACSM3Q53FZ2 586 aa12.72□□□□□ -0.37
MRPL55-220ENST00000411464 TINAGL1Q9GZM7 467 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-220ENST00000411464 SIGLEC8Q9NYZ4 499 aa12.72□□□□□ -0.37
MRPL55-220ENST00000411464 BRI3O95415 125 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 CSN3P07498 182 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 SCTP09683 121 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 PJVKQ0ZLH3 352 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 UNC119Q13432 240 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 INSL4Q14641 139 aa12.71□□□□□ -0.37
MRPL55-220ENST00000411464 RPEL1Q2QD12 228 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms