RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ZNF488Q96MN9 340 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 FOXL2P58012 376 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 COL13A1Q5TAT6 717 aaPredicted RBP9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 PPIAL4CA0A0B4J2A2 164 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 SOCS1O15524 211 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 SLC25A17O43808 307 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 PDE6DO43924 150 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 CELA2AP08217 269 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 PPIAL4GP0DN37 164 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 DRD3P35462 400 aa9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 KLF9Q13886 244 aaPredicted RBP9.78□□□□□ -0.84
PRPF40A-202ENST00000410080 HRKO00198 91 aa9.77□□□□□ -0.84
PRPF40A-202ENST00000410080 FAM168AQ92567 244 aa9.77□□□□□ -0.84
PRPF40A-202ENST00000410080 EEF1AKMT3Q96AZ1 226 aa9.77□□□□□ -0.84
PRPF40A-202ENST00000410080 PHYHIPLQ96FC7 376 aa9.77□□□□□ -0.84
PRPF40A-202ENST00000410080 WNT5BQ9H1J7 359 aa9.77□□□□□ -0.84
PRPF40A-202ENST00000410080 TOMM7Q9P0U1 55 aa9.77□□□□□ -0.84
PRPF40A-202ENST00000410080 ARRDC5A6NEK1 342 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 PRR32B1ATL7 298 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 ZFPL1O95159 310 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 ZFP30Q9Y2G7 519 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 LMX1BO60663 402 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 CTSSP25774 331 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 NUBPLQ8TB37 319 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 VN1R17PQ8TDU5 208 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 SSC4DQ8WTU2 575 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 UCP2P55851 309 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 RELQ04864 619 aaPredicted RBP9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 C2orf83Q53S99 150 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 FAM159AQ6UWV7 190 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 SPRED2Q7Z698 418 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 GSX2Q9BZM3 304 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 CCL28Q9NRJ3 127 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 DIRC3C9JPN6 131 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 HSF4Q9ULV5 492 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 CDK2AP2O75956 126 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 PCSK4Q6UW60 755 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 ITLN1Q8WWA0 313 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 MS4A3Q96HJ5 214 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 PRSS50Q9UI38 385 aa9.77□□□□□ -0.85
PRPF40A-202ENST00000410080 M0R143 59 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 RBFOX2O43251 390 aaKnown RBP eCLIP9.76□□□□□ -0.852e-9■■■■■ 32.3
PRPF40A-202ENST00000410080 IGHV3-48P01763 117 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 GP1BAP07359 652 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 BEND2Q8NDZ0 799 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 DUSP21Q9H596 190 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 LCTP09848 1927 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 CD99P14209 185 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 TSPOP30536 169 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 LIPT2A6NK58 231 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 SPNP16150 400 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 ANOS1P23352 680 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 DNASE2BQ8WZ79 361 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 PSCAO43653 123 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 ISG15P05161 165 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 ZG16BQ96DA0 208 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 FGF20Q9NP95 211 aaPredicted RBP9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 FRRS1LQ9P0K9 344 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 HIST1H1AQ02539 215 aaPredicted RBP9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 MBNL2Q5VZF2 373 aaKnown RBP9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 HSPB7Q9UBY9 170 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 F11RQ9Y624 299 aaKnown RBP9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 LRP5O75197 1615 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 NYNRINQ9P2P1 1898 aaKnown RBP9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 NKX2-2O95096 273 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 TRGV3P03979 118 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 CD74P04233 296 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 RPL27AP46776 148 aaKnown RBP9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 DLK1P80370 383 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 AANATQ16613 207 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 ATP1A1-AS1Q5TC04 95 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 MRGPRGQ86SM5 289 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 LINC00596Q86U02 117 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 STHQ8IWL8 128 aa9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 REPIN1Q9BWE0 567 aaKnown RBP9.76□□□□□ -0.85
PRPF40A-202ENST00000410080 KCNE1BA0A087WTH5 132 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 KBTBD11O94819 623 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 CD69Q07108 199 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 GAB4Q2WGN9 574 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 ADAD2Q8NCV1 583 aaKnown RBP9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 OPN4Q9UHM6 478 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 FUT9Q9Y231 359 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 TRGV2A0A075B6R0 118 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 ZNF688P0C7X2 276 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 MFAP4P55083 255 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 TGIF1Q15583 401 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 LILRA6Q6PI73 481 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 PEX11BO96011 259 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 PGA4P0DJD7 388 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 PGA5P0DJD9 388 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 ST3GAL2Q16842 350 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 MRM1Q6IN84 353 aaKnown RBP9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 LINC01587Q99440 93 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 ALKBH7Q9BT30 221 aaPredicted RBP9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 OR2W1Q9Y3N9 320 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 TBL2Q9Y4P3 447 aaKnown RBP9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 PPYP01298 95 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 SMIM4Q8WVI0 70 aa9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 RGP1Q92546 391 aaPredicted RBP9.75□□□□□ -0.85
PRPF40A-202ENST00000410080 MRPL24Q96A35 216 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms