RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 ZNF585BQ52M93 769 aa11.65□□□□□ -0.54
LIMS2-206ENST00000409754 ZNF66Q6ZN08 573 aa11.65□□□□□ -0.54
LIMS2-206ENST00000409754 TCTEX1D1Q8N7M0 179 aa11.65□□□□□ -0.54
LIMS2-206ENST00000409754 LSM10Q969L4 123 aaKnown RBP11.65□□□□□ -0.54
LIMS2-206ENST00000409754 ZNF471Q9BX82 626 aaPredicted RBP11.65□□□□□ -0.54
LIMS2-206ENST00000409754 PLEKHA2Q9HB19 425 aa11.65□□□□□ -0.54
LIMS2-206ENST00000409754 FAM212BQ9NTI7 297 aaPredicted RBP11.65□□□□□ -0.54
LIMS2-206ENST00000409754 SLC25A10Q9UBX3 287 aaPredicted RBP11.65□□□□□ -0.54
LIMS2-206ENST00000409754 PSG11Q9UQ72 335 aa11.65□□□□□ -0.54
LIMS2-206ENST00000409754 TANC2Q9HCD6 1990 aa11.65□□□□□ -0.54
LIMS2-206ENST00000409754 ARFGEF3Q5TH69 2177 aa11.65□□□□□ -0.55
LIMS2-206ENST00000409754 A0A1B0GU03 582 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 hADV38S2A0JD32 116 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 ST8SIA5O15466 376 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 SPDEFO95238 335 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 IGKV1-39P01597 117 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 IGKV1D-39P04432 117 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 ZNF16P17020 682 aaPredicted RBP11.64□□□□□ -0.55
LIMS2-206ENST00000409754 RPL12P30050 165 aaKnown RBP11.64□□□□□ -0.55
LIMS2-206ENST00000409754 MEF2CQ06413 473 aaPredicted RBP11.64□□□□□ -0.55
LIMS2-206ENST00000409754 TCF23Q7RTU1 214 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 STOML3Q8TAV4 291 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 SDHAF2Q9NX18 166 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 GFOD1Q9NXC2 390 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 KAAG1Q9UBP8 84 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 NOTCH2Q04721 2471 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 LINC00862A6NCI5 91 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 A6NNC1 897 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 TAAR5O14804 337 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 NDUFA2O43678 99 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 NDUFB7P17568 137 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 S100A1P23297 94 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 NKX2-1P43699 371 aaPredicted RBP11.64□□□□□ -0.55
LIMS2-206ENST00000409754 P2RY1P47900 373 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 HFEQ30201 348 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 ALKAL2Q6UX46 152 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 GPR146Q96CH1 333 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 PHYHIPLQ96FC7 376 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 HSD17B10Q99714 261 aaKnown RBP11.64□□□□□ -0.55
LIMS2-206ENST00000409754 TAS2R3Q9NYW6 316 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 RCL1Q9Y2P8 373 aaKnown RBP11.64□□□□□ -0.55
LIMS2-206ENST00000409754 LINC00312Q9Y6C7 94 aa11.64□□□□□ -0.55
LIMS2-206ENST00000409754 AKAP9Q99996 3911 aa11.63□□□□□ -0.55
LIMS2-206ENST00000409754 PITX3O75364 302 aa11.63□□□□□ -0.55
LIMS2-206ENST00000409754 FSTL3O95633 263 aa11.63□□□□□ -0.55
LIMS2-206ENST00000409754 GPR12P47775 334 aa11.63□□□□□ -0.55
LIMS2-206ENST00000409754 RAB7AP51149 207 aa11.63□□□□□ -0.55
LIMS2-206ENST00000409754 RPL30P62888 115 aaKnown RBP11.63□□□□□ -0.55
LIMS2-206ENST00000409754 ID3Q02535 119 aa11.63□□□□□ -0.55
LIMS2-206ENST00000409754 GPR157Q5UAW9 335 aa11.63□□□□□ -0.55
LIMS2-206ENST00000409754 DMBX1Q8NFW5 382 aa11.63□□□□□ -0.55
LIMS2-206ENST00000409754 C11orf1Q9H5F2 150 aa11.63□□□□□ -0.55
LIMS2-206ENST00000409754 CYTL1Q9NRR1 136 aa11.63□□□□□ -0.55
LIMS2-206ENST00000409754 CBLN4Q9NTU7 201 aa11.63□□□□□ -0.55
LIMS2-206ENST00000409754 IDI2-AS1Q9NZ38 188 aa11.63□□□□□ -0.55
LIMS2-206ENST00000409754 LPAR3Q9UBY5 353 aa11.63□□□□□ -0.55
LIMS2-206ENST00000409754 GAB2Q9UQC2 676 aa11.63□□□□□ -0.55
LIMS2-206ENST00000409754 DSCAML1Q8TD84 2053 aa11.62□□□□□ -0.55
LIMS2-206ENST00000409754 A0A0G2JRQ6 117 aa11.62□□□□□ -0.55
LIMS2-206ENST00000409754 NDUFB3O43676 98 aa11.62□□□□□ -0.55
LIMS2-206ENST00000409754 IGKV1-5P01602 117 aa11.62□□□□□ -0.55
LIMS2-206ENST00000409754 OMGP23515 440 aa11.62□□□□□ -0.55
LIMS2-206ENST00000409754 LPAR6P43657 344 aa11.62□□□□□ -0.55
LIMS2-206ENST00000409754 Q3ZCU0 254 aa11.62□□□□□ -0.55
LIMS2-206ENST00000409754 LRRC10Q5BKY1 277 aa11.62□□□□□ -0.55
LIMS2-206ENST00000409754 FGFRL1Q8N441 504 aa11.62□□□□□ -0.55
LIMS2-206ENST00000409754 OR10A7Q8NGE5 316 aa11.62□□□□□ -0.55
LIMS2-206ENST00000409754 RNASE11Q8TAA1 199 aaKnown RBP11.62□□□□□ -0.55
LIMS2-206ENST00000409754 TCTEX1D2Q8WW35 142 aa11.62□□□□□ -0.55
LIMS2-206ENST00000409754 ZC4H2Q9NQZ6 224 aa11.62□□□□□ -0.55
LIMS2-206ENST00000409754 ANKRD17O75179 2603 aaKnown RBP11.62□□□□□ -0.55
LIMS2-206ENST00000409754 GPR137BO60478 399 aa11.61□□□□□ -0.55
LIMS2-206ENST00000409754 ATG12O94817 140 aa11.61□□□□□ -0.55
LIMS2-206ENST00000409754 TPT1P13693 172 aaKnown RBP11.61□□□□□ -0.55
LIMS2-206ENST00000409754 MMP9P14780 707 aa11.61□□□□□ -0.55
LIMS2-206ENST00000409754 PVALBP20472 110 aaPredicted RBP11.61□□□□□ -0.55
LIMS2-206ENST00000409754 AKR1C2P52895 323 aa11.61□□□□□ -0.55
LIMS2-206ENST00000409754 RPL31P62899 125 aaKnown RBP11.61□□□□□ -0.55
LIMS2-206ENST00000409754 TLE4Q04727 773 aa11.61□□□□□ -0.55
LIMS2-206ENST00000409754 CXorf66Q5JRM2 361 aaPredicted RBP11.61□□□□□ -0.55
LIMS2-206ENST00000409754 BTNL3Q6UXE8 466 aa11.61□□□□□ -0.55
LIMS2-206ENST00000409754 ABHD14AQ9BUJ0 271 aa11.61□□□□□ -0.55
LIMS2-206ENST00000409754 IFI27L2Q9H2X8 130 aa11.61□□□□□ -0.55
LIMS2-206ENST00000409754 GAL3ST2Q9H3Q3 398 aa11.61□□□□□ -0.55
LIMS2-206ENST00000409754 ARID1AO14497 2285 aa11.6□□□□□ -0.55
LIMS2-206ENST00000409754 MAST4O15021 2626 aa11.6□□□□□ -0.55
LIMS2-206ENST00000409754 FCN3O75636 299 aa11.6□□□□□ -0.55
LIMS2-206ENST00000409754 DUTP33316 252 aaKnown RBP11.6□□□□□ -0.55
LIMS2-206ENST00000409754 ZNF134P52741 427 aa11.6□□□□□ -0.55
LIMS2-206ENST00000409754 BRWD1-AS2P59051 145 aa11.6□□□□□ -0.55
LIMS2-206ENST00000409754 POLR2GP62487 172 aaKnown RBP eCLIP11.6□□□□□ -0.55
LIMS2-206ENST00000409754 C11orf71Q6IPW1 123 aa11.6□□□□□ -0.55
LIMS2-206ENST00000409754 LYPD2Q6UXB3 125 aa11.6□□□□□ -0.55
LIMS2-206ENST00000409754 OTOGQ6ZRI0 2925 aa11.6□□□□□ -0.55
LIMS2-206ENST00000409754 SPAG16Q8N0X2 631 aa11.6□□□□□ -0.55
LIMS2-206ENST00000409754 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.6□□□□□ -0.55
LIMS2-206ENST00000409754 CD300LFQ8TDQ1 290 aa11.6□□□□□ -0.55
LIMS2-206ENST00000409754 NRGNQ92686 78 aa11.6□□□□□ -0.55
LIMS2-206ENST00000409754 RAB1BQ9H0U4 201 aa11.6□□□□□ -0.55
LIMS2-206ENST00000409754 SLC25A32Q9H2D1 315 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms