RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 PROP1O75360 226 aa15.34■□□□□ 0.05
TSPAN4-209ENST00000409543 RBBP9O75884 186 aa15.34■□□□□ 0.05
TSPAN4-209ENST00000409543 FCGR3AP08637 254 aa15.34■□□□□ 0.05
TSPAN4-209ENST00000409543 PPIFP30405 207 aaKnown RBP15.34■□□□□ 0.05
TSPAN4-209ENST00000409543 GLDNQ6ZMI3 551 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-209ENST00000409543 RAX2Q96IS3 184 aa15.34■□□□□ 0.05
TSPAN4-209ENST00000409543 RNF5Q99942 180 aa15.34■□□□□ 0.05
TSPAN4-209ENST00000409543 TOLLIPQ9H0E2 274 aa15.34■□□□□ 0.05
TSPAN4-209ENST00000409543 TXNL4BQ9NX01 149 aaKnown RBP15.34■□□□□ 0.05
TSPAN4-209ENST00000409543 RDH8Q9NYR8 311 aa15.34■□□□□ 0.05
TSPAN4-209ENST00000409543 ZNF221Q9UK13 617 aa15.34■□□□□ 0.05
TSPAN4-209ENST00000409543 RNF150Q9ULK6 438 aa15.34■□□□□ 0.05
TSPAN4-209ENST00000409543 A0A0B4J203 849 aa15.33■□□□□ 0.04
TSPAN4-209ENST00000409543 H7C2Y5 167 aa15.33■□□□□ 0.04
TSPAN4-209ENST00000409543 RRHO14718 337 aa15.33■□□□□ 0.04
TSPAN4-209ENST00000409543 ATP6V0E1O15342 81 aa15.33■□□□□ 0.04
TSPAN4-209ENST00000409543 FABP7O15540 132 aa15.33■□□□□ 0.04
TSPAN4-209ENST00000409543 GSTP1P09211 210 aaKnown RBP15.33■□□□□ 0.04
TSPAN4-209ENST00000409543 HIST1H1DP16402 221 aaKnown RBP15.33■□□□□ 0.04
TSPAN4-209ENST00000409543 GNB3P16520 340 aa15.33■□□□□ 0.04
TSPAN4-209ENST00000409543 EGFEM1PQ0D2K5 195 aa15.33■□□□□ 0.04
TSPAN4-209ENST00000409543 OR8U1Q8NH10 309 aa15.33■□□□□ 0.04
TSPAN4-209ENST00000409543 DUX3Q96PT4 197 aa15.33■□□□□ 0.04
TSPAN4-209ENST00000409543 PARP11Q9NR21 331 aa15.33■□□□□ 0.04
TSPAN4-209ENST00000409543 STUB1Q9UNE7 303 aa15.33■□□□□ 0.04
TSPAN4-209ENST00000409543 WSB1Q9Y6I7 421 aa15.33■□□□□ 0.04
TSPAN4-209ENST00000409543 TRAV41A0A0B4J266 112 aa15.32■□□□□ 0.04
TSPAN4-209ENST00000409543 G3V318 75 aa15.32■□□□□ 0.04
TSPAN4-209ENST00000409543 DIRAS3O95661 229 aa15.32■□□□□ 0.04
TSPAN4-209ENST00000409543 KRTAP10-11P60412 298 aa15.32■□□□□ 0.04
TSPAN4-209ENST00000409543 ZNF660Q6AZW8 331 aaPredicted RBP15.32■□□□□ 0.04
TSPAN4-209ENST00000409543 ZNF773Q6PK81 442 aa15.32■□□□□ 0.04
TSPAN4-209ENST00000409543 TPRA1Q86W33 373 aa15.32■□□□□ 0.04
TSPAN4-209ENST00000409543 DRAXINQ8NBI3 349 aaPredicted RBP15.32■□□□□ 0.04
TSPAN4-209ENST00000409543 MYOZ3Q8TDC0 251 aa15.32■□□□□ 0.04
TSPAN4-209ENST00000409543 C4orf3Q8WVX3 66 aa15.32■□□□□ 0.04
TSPAN4-209ENST00000409543 DPF1Q92782 380 aa15.32■□□□□ 0.04
TSPAN4-209ENST00000409543 CABLES2Q9BTV7 478 aa15.32■□□□□ 0.04
TSPAN4-209ENST00000409543 A0A075B6Q4 140 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 NOTOA8MTQ0 251 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 IGLV1-40P01703 118 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 GSTT2P0CG29 244 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 GSTT2BP0CG30 244 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 ARL6IP1Q15041 203 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 SRSF7Q16629 238 aaKnown RBP eCLIP15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 IGSF11Q5DX21 431 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 TMEM65Q6PI78 240 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 ZNF383Q8NA42 475 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 MINDY2Q8NBR6 621 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 OR10J5Q8NHC4 309 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 ATG5Q9H1Y0 275 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 FBXL15Q9H469 300 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 SSR3Q9UNL2 185 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 GAB2Q9UQC2 676 aa15.31■□□□□ 0.04
TSPAN4-209ENST00000409543 TRBV6-7A0A0A0MS04 114 aa15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 SMIM30A4D0T7 59 aa15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 BET1O15155 118 aa15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 TFAP2AP05549 437 aa15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 HOXD3P31249 432 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 TALDO1P37837 337 aa15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 CRIP2P52943 208 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 CX3CL1P78423 397 aa15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 ARFRP1Q13795 201 aa15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 KIAA0141Q14154 515 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 PLGLAQ15195 96 aa15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 DEFB136Q30KP8 78 aa15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 Q6ZS49 121 aa15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 UBE2E2Q96LR5 201 aa15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 CENPOQ9BU64 300 aa15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 KLK15Q9H2R5 256 aa15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.3■□□□□ 0.04
TSPAN4-209ENST00000409543 FCN1O00602 326 aa15.29■□□□□ 0.04
TSPAN4-209ENST00000409543 RAB25P57735 213 aa15.29■□□□□ 0.04
TSPAN4-209ENST00000409543 NDPQ00604 133 aa15.29■□□□□ 0.04
TSPAN4-209ENST00000409543 PSG5Q15238 335 aa15.29■□□□□ 0.04
TSPAN4-209ENST00000409543 C19orf54Q5BKX5 351 aa15.29■□□□□ 0.04
TSPAN4-209ENST00000409543 PDPNQ86YL7 162 aa15.29■□□□□ 0.04
TSPAN4-209ENST00000409543 ZNF491Q8N8L2 437 aa15.29■□□□□ 0.04
TSPAN4-209ENST00000409543 TSNAXQ99598 290 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-209ENST00000409543 ZNF230Q9UIE0 474 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-209ENST00000409543 FBXO7Q9Y3I1 522 aa15.29■□□□□ 0.04
TSPAN4-209ENST00000409543 K7EIL1 84 aa15.28■□□□□ 0.04
TSPAN4-209ENST00000409543 M0R1X1 148 aa15.28■□□□□ 0.04
TSPAN4-209ENST00000409543 SPDEFO95238 335 aa15.28■□□□□ 0.04
TSPAN4-209ENST00000409543 APOA2P02652 100 aa15.28■□□□□ 0.04
TSPAN4-209ENST00000409543 IGKV1-16P04430 117 aa15.28■□□□□ 0.04
TSPAN4-209ENST00000409543 OR8U9P0C7N5 309 aa15.28■□□□□ 0.04
TSPAN4-209ENST00000409543 LINC00205P59089 165 aa15.28■□□□□ 0.04
TSPAN4-209ENST00000409543 OR5M8Q8NGP6 311 aa15.28■□□□□ 0.04
TSPAN4-209ENST00000409543 MAFIPQ8WZ33 124 aa15.28■□□□□ 0.04
TSPAN4-209ENST00000409543 OR51E2Q9H255 320 aa15.28■□□□□ 0.04
TSPAN4-209ENST00000409543 METTL1Q9UBP6 276 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-209ENST00000409543 VSIG4Q9Y279 399 aa15.28■□□□□ 0.04
TSPAN4-209ENST00000409543 NUBP2Q9Y5Y2 271 aa15.28■□□□□ 0.04
TSPAN4-209ENST00000409543 WI2-2373I1.2A0A1W2PRP0 233 aa15.27■□□□□ 0.04
TSPAN4-209ENST00000409543 EGR2P11161 476 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-209ENST00000409543 DTYMKP23919 212 aa15.27■□□□□ 0.04
TSPAN4-209ENST00000409543 RAB9AP51151 201 aa15.27■□□□□ 0.04
TSPAN4-209ENST00000409543 RPS16P62249 146 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms