RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TOMM40LQ969M1 308 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 RPEQ96AT9 228 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 MALSU1Q96EH3 234 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 ABHD14BQ96IU4 210 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 SLC25A21Q9BQT8 299 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 RNF150Q9ULK6 438 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 SAA2-SAA4A0A096LPE2 208 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 OR5H14A6NHG9 310 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 OOSP1A8MZH6 123 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 TXNL1O43396 289 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 SAA2P0DJI9 122 aaPredicted RBP13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 S100GP29377 79 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 ARHGDIBP52566 201 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 SRSF2Q01130 221 aaKnown RBP13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 RBMS2Q15434 407 aaKnown RBP13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 CCDC144NLQ6NUI1 221 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 BRD3OSQ6XYD6 125 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 SLC38A6Q8IZM9 456 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 ZBTB34Q8NCN2 500 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 ZFAND1Q8TCF1 268 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 AKR1E2Q96JD6 320 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 FXYD6Q9H0Q3 95 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 ZNRD1Q9P1U0 126 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 TBC1D24Q9ULP9 559 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 FAM96BQ9Y3D0 163 aa13.38□□□□□ -0.27
TSPAN4-208ENST00000409531 HSD17B6O14756 317 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 VENTXO95231 258 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 GAPDHP04406 335 aaKnown RBP13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 PGAM2P15259 253 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 HILS1P60008 231 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 TUSC1Q2TAM9 212 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 KRTAP24-1Q3LI83 254 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 TPTE2P1Q5T6R2 138 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 RUSC1-AS1Q66K80 236 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 C9orf139Q6ZV77 190 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 ODF3L1Q8IXM7 274 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 CMTM1Q8IZ96 169 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 ST6GALNAC6Q969X2 333 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 ZNF486Q96H40 463 aaPredicted RBP13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 JMJD8Q96S16 334 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 COPZ2Q9P299 210 aa13.37□□□□□ -0.27
TSPAN4-208ENST00000409531 LY6LH3BQJ8 138 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 GPR31O00270 319 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 FBP1P09467 338 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 ZNF816Q0VGE8 651 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 ZNF833PQ6ZTB9 187 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 LHFPL4Q7Z7J7 247 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 LDLRAD3Q86YD5 345 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 TGIF2LXQ8IUE1 241 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 BCL6BQ8N143 479 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 OR8H3Q8N146 312 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 DRAM1Q8N682 238 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 POC5Q8NA72 575 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 OR13C8Q8NGS7 320 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 MARCH1Q8TCQ1 289 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 RSRP1Q9BUV0 290 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 DPAGT1Q9H3H5 408 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 CCL28Q9NRJ3 127 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 SDHAF2Q9NX18 166 aa13.36□□□□□ -0.27
TSPAN4-208ENST00000409531 FAM240BA0A1B0GVZ2 78 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 SLC6A1P30531 599 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 GNRHRP30968 328 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 BTCP35070 178 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 CCR6P51684 374 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 SSX2Q16385 188 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 ABCA11PQ4W5N1 156 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 RPL39P5Q59GN2 51 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 RBMS3Q6XE24 437 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 ZNF818PQ6ZRF7 136 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 ZDHHC22Q8N966 263 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 BVESQ8NE79 360 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 ENKURQ8TC29 256 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 RTN4IP1Q8WWV3 396 aaPredicted RBP13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 ADTRPQ96IZ2 230 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 ZNF251Q9BRH9 671 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 C14orf166Q9Y224 244 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 HILPDAQ9Y5L2 63 aa13.35□□□□□ -0.27
TSPAN4-208ENST00000409531 M0R1X1 148 aa13.34□□□□□ -0.27
TSPAN4-208ENST00000409531 NDUFB6O95139 128 aa13.34□□□□□ -0.27
TSPAN4-208ENST00000409531 CTSDP07339 412 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-208ENST00000409531 BAMBIQ13145 260 aa13.34□□□□□ -0.27
TSPAN4-208ENST00000409531 LDLRAD2Q5SZI1 272 aa13.34□□□□□ -0.27
TSPAN4-208ENST00000409531 ZFAND2BQ8WV99 257 aa13.34□□□□□ -0.27
TSPAN4-208ENST00000409531 HSD17B10Q99714 261 aaKnown RBP13.34□□□□□ -0.27
TSPAN4-208ENST00000409531 GPR132Q9UNW8 380 aa13.34□□□□□ -0.27
TSPAN4-208ENST00000409531 A0A0U1RQK1 487 aa13.33□□□□□ -0.28
TSPAN4-208ENST00000409531 IGLV2-14P01704 120 aa13.33□□□□□ -0.28
TSPAN4-208ENST00000409531 TAGLNQ01995 201 aaKnown RBP13.33□□□□□ -0.28
TSPAN4-208ENST00000409531 CATR1Q13166 79 aa13.33□□□□□ -0.28
TSPAN4-208ENST00000409531 ZNF66Q6ZN08 573 aa13.33□□□□□ -0.28
TSPAN4-208ENST00000409531 SIGLECL1Q8N7X8 197 aa13.33□□□□□ -0.28
TSPAN4-208ENST00000409531 CCDC71LQ8N9Z2 235 aa13.33□□□□□ -0.28
TSPAN4-208ENST00000409531 MRGPRFQ96AM1 343 aa13.33□□□□□ -0.28
TSPAN4-208ENST00000409531 AJUBAQ96IF1 538 aa13.33□□□□□ -0.28
TSPAN4-208ENST00000409531 C19orf24Q9BVV8 132 aa13.33□□□□□ -0.28
TSPAN4-208ENST00000409531 MEGF9Q9H1U4 602 aa13.33□□□□□ -0.28
TSPAN4-208ENST00000409531 IGHV1-3A0A0C4DH29 117 aa13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 TRIM77I1YAP6 450 aa13.32□□□□□ -0.28
TSPAN4-208ENST00000409531 PROP1O75360 226 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms