RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 C13orf42A0A1B0GVH6 325 aa12.79□□□□□ -0.36
SHANK2-204ENST00000409530 TOR1AO14656 332 aa12.79□□□□□ -0.36
SHANK2-204ENST00000409530 RGS13O14921 159 aa12.79□□□□□ -0.36
SHANK2-204ENST00000409530 USF1P22415 310 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-204ENST00000409530 PAX6P26367 422 aa12.79□□□□□ -0.36
SHANK2-204ENST00000409530 ZNF816Q0VGE8 651 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-204ENST00000409530 DIAPH2-AS1Q14236 149 aa12.79□□□□□ -0.36
SHANK2-204ENST00000409530 OR52M1Q8NGK5 317 aa12.79□□□□□ -0.36
SHANK2-204ENST00000409530 COQ8AQ8NI60 647 aa12.79□□□□□ -0.36
SHANK2-204ENST00000409530 MITD1Q8WV92 249 aa12.79□□□□□ -0.36
SHANK2-204ENST00000409530 METTL8Q9H825 291 aaKnown RBP12.79□□□□□ -0.36
SHANK2-204ENST00000409530 ZANQ9Y493 2812 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 hCG_1809904A0A1W2PP81 198 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 A0A1W2PPE2 198 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 A0A1W2PR64 198 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 A0A1W2PRV1 198 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 LINC00473A8K010 186 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 MPTX1A8MV57 137 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 FOXH1O75593 365 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 RAB7AP51149 207 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 NKX2-5P52952 324 aaPredicted RBP12.78□□□□□ -0.36
SHANK2-204ENST00000409530 DSCR9P59020 149 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 TMEM268Q5VZI3 342 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 SLC25A48Q6ZT89 311 aaKnown RBP12.78□□□□□ -0.36
SHANK2-204ENST00000409530 LHFPL5Q8TAF8 219 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 PDCD10Q9BUL8 212 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 TOLLIPQ9H0E2 274 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 ZFHX3Q15911 3703 aa12.78□□□□□ -0.36
SHANK2-204ENST00000409530 ZNF469Q96JG9 3925 aaPredicted RBP12.77□□□□□ -0.36
SHANK2-204ENST00000409530 J3QR06 171 aa12.77□□□□□ -0.36
SHANK2-204ENST00000409530 RAMP3O60896 148 aa12.77□□□□□ -0.36
SHANK2-204ENST00000409530 SULT1A3P0DMM9 295 aa12.77□□□□□ -0.36
SHANK2-204ENST00000409530 SULT1A4P0DMN0 295 aa12.77□□□□□ -0.36
SHANK2-204ENST00000409530 F2RP25116 425 aa12.77□□□□□ -0.36
SHANK2-204ENST00000409530 TMEM187Q14656 261 aa12.77□□□□□ -0.36
SHANK2-204ENST00000409530 ODF3L1Q8IXM7 274 aa12.77□□□□□ -0.36
SHANK2-204ENST00000409530 GLYATL2Q8WU03 294 aa12.77□□□□□ -0.36
SHANK2-204ENST00000409530 SEC22AQ96IW7 307 aa12.77□□□□□ -0.36
SHANK2-204ENST00000409530 IGHV3OR16-10A0A075B7F0 116 aa12.77□□□□□ -0.37
SHANK2-204ENST00000409530 C5orf51A6NDU8 294 aa12.77□□□□□ -0.37
SHANK2-204ENST00000409530 PROP1O75360 226 aa12.77□□□□□ -0.37
SHANK2-204ENST00000409530 SLC25A16P16260 332 aa12.77□□□□□ -0.37
SHANK2-204ENST00000409530 H2BFSP57053 126 aa12.77□□□□□ -0.37
SHANK2-204ENST00000409530 LRRC37A5PQ49AS3 106 aa12.77□□□□□ -0.37
SHANK2-204ENST00000409530 OR10A7Q8NGE5 316 aa12.77□□□□□ -0.37
SHANK2-204ENST00000409530 OR9G1Q8NH87 305 aa12.77□□□□□ -0.37
SHANK2-204ENST00000409530 CLEC7AQ9BXN2 247 aa12.77□□□□□ -0.37
SHANK2-204ENST00000409530 LIN7CQ9NUP9 197 aaKnown RBP12.77□□□□□ -0.37
SHANK2-204ENST00000409530 A8MXK9 166 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 RAB29O14966 203 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 TOX4O94842 621 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 ARG1P05089 322 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 SERPINE2P07093 398 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 RND3P61587 244 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 LYZL2Q7Z4W2 148 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 ZNF695Q8IW36 515 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 SLC35G3Q8N808 338 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 RNASE11Q8TAA1 199 aaKnown RBP12.76□□□□□ -0.37
SHANK2-204ENST00000409530 AKR1E2Q96JD6 320 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 TMEM222Q9H0R3 208 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 FCGR3BO75015 233 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 NXPH3O95157 252 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 EPHA1P21709 976 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 DVL1P1P54792 670 aaPredicted RBP12.76□□□□□ -0.37
SHANK2-204ENST00000409530 CATR1Q13166 79 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 TMEM30BQ3MIR4 351 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 NCR3LG1Q68D85 454 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 LIAT1Q6ZQX7 453 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 SPAG16Q8N0X2 631 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 WFDC11Q8NEX6 87 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 LHX4Q969G2 390 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 ST6GAL2Q96JF0 529 aa12.76□□□□□ -0.37
SHANK2-204ENST00000409530 ZNF436Q9C0F3 470 aaPredicted RBP12.76□□□□□ -0.37
SHANK2-204ENST00000409530 H0Y980 276 aa12.75□□□□□ -0.37
SHANK2-204ENST00000409530 CR1P17927 2039 aa12.75□□□□□ -0.37
SHANK2-204ENST00000409530 PRRC2AP48634 2157 aaKnown RBP12.75□□□□□ -0.37
SHANK2-204ENST00000409530 PAX2Q02962 417 aa12.75□□□□□ -0.37
SHANK2-204ENST00000409530 IZUMO4Q1ZYL8 232 aa12.75□□□□□ -0.37
SHANK2-204ENST00000409530 GALNT14Q96FL9 552 aa12.75□□□□□ -0.37
SHANK2-204ENST00000409530 MRPL20Q9BYC9 149 aaKnown RBP12.75□□□□□ -0.37
SHANK2-204ENST00000409530 PIPOXQ9P0Z9 390 aa12.75□□□□□ -0.37
SHANK2-204ENST00000409530 IGHV3-72A0A0B4J1Y9 119 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 M0R1W7 72 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 DUTP33316 252 aaKnown RBP12.74□□□□□ -0.37
SHANK2-204ENST00000409530 LY6G6FQ5SQ64 297 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 MSI2Q96DH6 328 aaKnown RBP12.74□□□□□ -0.37
SHANK2-204ENST00000409530 S1PR3Q99500 378 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 RNF212BA8MTL3 300 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 SMAD7O15105 426 aaKnown RBP12.74□□□□□ -0.37
SHANK2-204ENST00000409530 S1PR2O95136 353 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 MSMBP08118 114 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 HOXB4P17483 251 aaPredicted RBP12.74□□□□□ -0.37
SHANK2-204ENST00000409530 AKR1C2P52895 323 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 KRTAP1-3Q8IUG1 177 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 LGI3Q8N145 548 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 LRRC75A-AS1Q8N1F1 130 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 OR5M8Q8NGP6 311 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 OR13D1Q8NGV5 346 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 ZNF251Q9BRH9 671 aa12.74□□□□□ -0.37
SHANK2-204ENST00000409530 REG4Q9BYZ8 158 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms