RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 GPR37O15354 613 aa11.52□□□□□ -0.56
GPNMB-203ENST00000409458 SCGB1D2O95969 90 aa11.52□□□□□ -0.56
GPNMB-203ENST00000409458 VDAC1P21796 283 aa11.52□□□□□ -0.56
GPNMB-203ENST00000409458 DUTP33316 252 aaKnown RBP11.52□□□□□ -0.56
GPNMB-203ENST00000409458 SP5Q6BEB4 398 aaPredicted RBP11.52□□□□□ -0.56
GPNMB-203ENST00000409458 SLC25A48Q6ZT89 311 aaKnown RBP11.52□□□□□ -0.56
GPNMB-203ENST00000409458 LYG1Q8N1E2 194 aa11.52□□□□□ -0.56
GPNMB-203ENST00000409458 C11orf42Q8N5U0 333 aa11.52□□□□□ -0.56
GPNMB-203ENST00000409458 THAP6Q8TBB0 222 aa11.52□□□□□ -0.56
GPNMB-203ENST00000409458 RNF126Q9BV68 326 aa11.52□□□□□ -0.56
GPNMB-203ENST00000409458 OR5AC2Q9NZP5 309 aa11.52□□□□□ -0.56
GPNMB-203ENST00000409458 L7N2F9 121 aa11.52□□□□□ -0.57
GPNMB-203ENST00000409458 PLA2G2AP14555 144 aa11.52□□□□□ -0.57
GPNMB-203ENST00000409458 RPA2P15927 270 aa11.52□□□□□ -0.57
GPNMB-203ENST00000409458 LPAR6P43657 344 aa11.52□□□□□ -0.57
GPNMB-203ENST00000409458 GNB2P62879 340 aa11.52□□□□□ -0.57
GPNMB-203ENST00000409458 ZNF816Q0VGE8 651 aaPredicted RBP11.52□□□□□ -0.57
GPNMB-203ENST00000409458 TMEM65Q6PI78 240 aa11.52□□□□□ -0.57
GPNMB-203ENST00000409458 ZNF546Q86UE3 836 aa11.52□□□□□ -0.57
GPNMB-203ENST00000409458 SPAG16Q8N0X2 631 aa11.52□□□□□ -0.57
GPNMB-203ENST00000409458 OR4D5Q8NGN0 318 aa11.52□□□□□ -0.57
GPNMB-203ENST00000409458 C8orf46Q8TAG6 207 aa11.52□□□□□ -0.57
GPNMB-203ENST00000409458 ZNF251Q9BRH9 671 aa11.52□□□□□ -0.57
GPNMB-203ENST00000409458 TNFSF18Q9UNG2 199 aa11.52□□□□□ -0.57
GPNMB-203ENST00000409458 GAB2Q9UQC2 676 aa11.52□□□□□ -0.57
GPNMB-203ENST00000409458 UTP20O75691 2785 aaKnown RBP11.51□□□□□ -0.57
GPNMB-203ENST00000409458 PPIAL4CA0A0B4J2A2 164 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 RAB29O14966 203 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 KCNAB3O43448 404 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 TSC22D2O75157 780 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 S1PR2O95136 353 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 IGKV1-5P01602 117 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 PPIAL4GP0DN37 164 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 IGHV1-8P0DP01 117 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 LYL1P12980 280 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 NCR3LG1Q68D85 454 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 PRSS54Q6PEW0 395 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 FOXRED2Q8IWF2 684 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.51□□□□□ -0.57
GPNMB-203ENST00000409458 DCUN1D4Q92564 292 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 GPR146Q96CH1 333 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 SSBP3Q9BWW4 388 aaPredicted RBP11.51□□□□□ -0.57
GPNMB-203ENST00000409458 MFFQ9GZY8 342 aa11.51□□□□□ -0.57
GPNMB-203ENST00000409458 SPTAN1Q13813 2472 aaKnown RBP11.51□□□□□ -0.57
GPNMB-203ENST00000409458 MALRD1Q5VYJ5 2156 aa11.5□□□□□ -0.57
GPNMB-203ENST00000409458 RNF222A6NCQ9 220 aa11.5□□□□□ -0.57
GPNMB-203ENST00000409458 MBPP02686 304 aaPredicted RBP11.5□□□□□ -0.57
GPNMB-203ENST00000409458 PET100P0DJ07 73 aa11.5□□□□□ -0.57
GPNMB-203ENST00000409458 EPHA1P21709 976 aa11.5□□□□□ -0.57
GPNMB-203ENST00000409458 AP2S1P53680 142 aaPredicted RBP11.5□□□□□ -0.57
GPNMB-203ENST00000409458 DLX1P56177 255 aa11.5□□□□□ -0.57
GPNMB-203ENST00000409458 ZNF295-AS1Q8N0V1 137 aa11.5□□□□□ -0.57
GPNMB-203ENST00000409458 LY6G5BQ8NDX9 201 aa11.5□□□□□ -0.57
GPNMB-203ENST00000409458 OR1S1Q8NH92 325 aa11.5□□□□□ -0.57
GPNMB-203ENST00000409458 RNASE11Q8TAA1 199 aaKnown RBP11.5□□□□□ -0.57
GPNMB-203ENST00000409458 RAB39BQ96DA2 213 aa11.5□□□□□ -0.57
GPNMB-203ENST00000409458 SPIN2AQ99865 258 aa11.5□□□□□ -0.57
GPNMB-203ENST00000409458 SPIN2BQ9BPZ2 258 aa11.5□□□□□ -0.57
GPNMB-203ENST00000409458 BPESC1Q9GZL8 116 aa11.5□□□□□ -0.57
GPNMB-203ENST00000409458 LSM5Q9Y4Y9 91 aaKnown RBP11.5□□□□□ -0.57
GPNMB-203ENST00000409458 SESN1Q9Y6P5 492 aa11.5□□□□□ -0.57
GPNMB-203ENST00000409458 A0A087X0M5 115 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 PIGBOS1A0A0B4J2F0 54 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 A0A1B0GX30 115 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 K7EPK0 472 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 IGHV2-5P01817 119 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 AKR1C2P52895 323 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 IZUMO4Q1ZYL8 232 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 THOC7Q6I9Y2 204 aaKnown RBP11.49□□□□□ -0.57
GPNMB-203ENST00000409458 FAM71E2Q8N5Q1 922 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 TCTEX1D1Q8N7M0 179 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 DDB2Q92466 427 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 NRGNQ92686 78 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 LSM10Q969L4 123 aaKnown RBP11.49□□□□□ -0.57
GPNMB-203ENST00000409458 SLA2Q9H6Q3 261 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 HEXA-AS1Q9H8Q6 139 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 FAM212BQ9NTI7 297 aaPredicted RBP11.49□□□□□ -0.57
GPNMB-203ENST00000409458 FAM208BQ5VWN6 2430 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 CHD6Q8TD26 2715 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 A0A1W2PPH5 198 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 FCGR3BO75015 233 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 DEDDO75618 318 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 COL8A1P27658 744 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 PDLIM4P50479 330 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 OPCMLQ14982 345 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 ESCO2Q56NI9 601 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 Q6ZRM9 215 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 TMUB2Q71RG4 321 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 LINC00311Q8N616 119 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 C8orf31Q8N9H6 132 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 ZNF596Q8TC21 504 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 RRNAD1Q96FB5 475 aaKnown RBP11.49□□□□□ -0.57
GPNMB-203ENST00000409458 GON7Q9BXV9 100 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 ARL6Q9H0F7 186 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 TMEM133Q9H2Q1 129 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 ONECUT1Q9UBC0 465 aa11.49□□□□□ -0.57
GPNMB-203ENST00000409458 AKAP6Q13023 2319 aa11.48□□□□□ -0.57
GPNMB-203ENST00000409458 LOC105371242A0A075B767 164 aa11.48□□□□□ -0.57
GPNMB-203ENST00000409458 KIAA1324LA8MWY0 1029 aaPredicted RBP11.48□□□□□ -0.57
GPNMB-203ENST00000409458 J3QR06 171 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms