RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 OR5D13Q8NGL4 314 aa9.07□□□□□ -0.96
NIF3L1-204ENST00000409357 LHX4Q969G2 390 aa9.07□□□□□ -0.96
NIF3L1-204ENST00000409357 STARD4Q96DR4 205 aa9.07□□□□□ -0.96
NIF3L1-204ENST00000409357 TXN2Q99757 166 aa9.07□□□□□ -0.96
NIF3L1-204ENST00000409357 SLC39A9Q9NUM3 307 aa9.07□□□□□ -0.96
NIF3L1-204ENST00000409357 RPH3ALQ9UNE2 315 aa9.07□□□□□ -0.96
NIF3L1-204ENST00000409357 SETXQ7Z333 2677 aaKnown RBP9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 IGHV5-51A0A0C4DH38 117 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 ANKUB1A6NFN9 424 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 DIRC3C9JPN6 131 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 K7ENP7 123 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 SIRPB1O00241 398 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 DEGS1O15121 323 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 PDE6DO43924 150 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 UTS2O95399 124 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 SERPINA7P05543 415 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 CTXN2P0C2S0 81 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 ADMP35318 185 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 HERV-K104P61576 105 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 HBG1P69891 147 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 HBG2P69892 147 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 ZNF154Q13106 437 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 RNF151Q2KHN1 245 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 CXorf66Q5JRM2 361 aaPredicted RBP9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 TMEM211Q6ICI0 200 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 INO80CQ6PI98 192 aaPredicted RBP9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 PLXDC1Q8IUK5 500 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 MUC15Q8N387 334 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 SIGLECL1Q8N7X8 197 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 OR8B12Q8NGG6 310 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 C11orf40Q8WZ69 217 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 TOMM40LQ969M1 308 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 PGAM5Q96HS1 289 aa9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 NXT1Q9UKK6 140 aaKnown RBP9.06□□□□□ -0.96
NIF3L1-204ENST00000409357 CHD3Q12873 2000 aaKnown RBP9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 A0A1W2PRS3 328 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 KIAA1324LA8MWY0 1029 aaPredicted RBP9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 RNF223E7ERA6 249 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 C17orf112F2Z3M2 114 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 ONECUT2O95948 504 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 MT-ND6P03923 174 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 FAHP16930 419 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 CDKN1AP38936 164 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 GRB2P62993 217 aaKnown RBP9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 MRPS34P82930 218 aaKnown RBP9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 PSG3Q16557 428 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 PHLDA2Q53GA4 152 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 FAM78BQ5VT40 261 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 C6orf201Q7Z4U5 140 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 ABHD12BQ7Z5M8 362 aaPredicted RBP9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 LINC00346Q8IVM7 164 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 ZNF709Q8N972 641 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 OR4P4Q8NGL7 312 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 ZNF524Q96C55 264 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 FOXN4Q96NZ1 517 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 DGAT2Q96PD7 388 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 SPRY4Q9C004 299 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 WDR61Q9GZS3 305 aaKnown RBP9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 SH3BGRL2Q9UJC5 107 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 UBE2J1Q9Y385 318 aaPredicted RBP9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 FER1L5A0AVI2 2057 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 SEC16AO15027 2179 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 COL12A1Q99715 3063 aa9.05□□□□□ -0.96
NIF3L1-204ENST00000409357 NBASA2RRP1 2371 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 TMED7-TICAM2A0A0A6YYA0 188 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 ALG1L2C9J202 215 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 MS4A18H0YCH9 400 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 SLC33A1O00400 549 aaPredicted RBP9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 ADAM20O43506 726 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 SERF1AO75920 110 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 CLPSP04118 112 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 CEACAM3P40198 252 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 UCNP55089 124 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 RHOBP62745 196 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 ARG2P78540 354 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 MS4A18Q3C1V0 323 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 DCAF12Q5T6F0 453 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 FAM71F2Q6NXP2 309 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 C1QL2Q7Z5L3 287 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 COMMD2Q86X83 199 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 CALHM1Q8IU99 346 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 SPACA5Q96QH8 159 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 ZDHHC11Q9H8X9 412 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 STARD5Q9NSY2 213 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 IL36GQ9NZH8 169 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 CLN8Q9UBY8 286 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 FBXL7Q9UJT9 491 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 FREM3P0C091 2139 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 CACNA1CQ13936 2221 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 FRG2CA6NGY1 282 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 VSTM2BA6NLU5 285 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 NPIPA5E9PKD4 350 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 H0Y980 276 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 IFNL4K9M1U5 179 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 PPYP01298 95 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 LIFP15018 202 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 OTX1P32242 354 aaPredicted RBP9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 GABRA2P47869 451 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 LY6DQ14210 128 aa9.04□□□□□ -0.96
NIF3L1-204ENST00000409357 SPIN3Q5JUX0 258 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms