RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 TPTE2P1Q5T6R2 138 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 IDO2Q6ZQW0 420 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 ZNF818PQ6ZRF7 136 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 CADM3Q8N126 398 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 LINC00311Q8N616 119 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 MARCH1Q8TCQ1 289 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 MOB3AQ96BX8 217 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 PPP1R14BQ96C90 147 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 ZNF48Q96MX3 618 aaPredicted RBP11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 MRPL20Q9BYC9 149 aaKnown RBP11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 TOLLIPQ9H0E2 274 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 SDHAF2Q9NX18 166 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 ZNF221Q9UK13 617 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 FAM96BQ9Y3D0 163 aa11.4□□□□□ -0.58
CHRNA1-204ENST00000409323 NAV3Q8IVL0 2385 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 FAM240BA0A1B0GVZ2 78 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 LEUTXA8MZ59 168 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 LY6LH3BQJ8 138 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 M0R1X1 148 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 IGLV2-14P01704 120 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 FAUP35544 74 aaKnown RBP11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 PHLDA2Q53GA4 152 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 FBLN7Q53RD9 439 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 LHFPL1Q86WI0 220 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 ARRDC1Q8N5I2 433 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 DRAM1Q8N682 238 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 OR13C8Q8NGS7 320 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 ST6GALNAC6Q969X2 333 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 DUX5Q96PT3 197 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 ZNF251Q9BRH9 671 aa11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 AMMECR1Q9Y4X0 333 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-204ENST00000409323 ANK3Q12955 4377 aaKnown RBP11.38□□□□□ -0.59
CHRNA1-204ENST00000409323 RAB29O14966 203 aa11.38□□□□□ -0.59
CHRNA1-204ENST00000409323 GNRHRP30968 328 aa11.38□□□□□ -0.59
CHRNA1-204ENST00000409323 OR2B11Q5JQS5 317 aa11.38□□□□□ -0.59
CHRNA1-204ENST00000409323 LY6G6FQ5SQ64 297 aa11.38□□□□□ -0.59
CHRNA1-204ENST00000409323 PLET1Q6UQ28 207 aa11.38□□□□□ -0.59
CHRNA1-204ENST00000409323 MOB3BQ86TA1 216 aa11.38□□□□□ -0.59
CHRNA1-204ENST00000409323 C8orf31Q8N9H6 132 aa11.38□□□□□ -0.59
CHRNA1-204ENST00000409323 TERB2Q8NHR7 220 aa11.38□□□□□ -0.59
CHRNA1-204ENST00000409323 ENKURQ8TC29 256 aa11.38□□□□□ -0.59
CHRNA1-204ENST00000409323 RTN4IP1Q8WWV3 396 aaPredicted RBP11.38□□□□□ -0.59
CHRNA1-204ENST00000409323 TMEM160Q9NX00 188 aa11.38□□□□□ -0.59
CHRNA1-204ENST00000409323 CDC42EP3Q9UKI2 254 aa11.38□□□□□ -0.59
CHRNA1-204ENST00000409323 TBL2Q9Y4P3 447 aaKnown RBP11.38□□□□□ -0.59
CHRNA1-204ENST00000409323 IL3RAP26951 378 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 MINOS1Q5TGZ0 78 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 ZNF833PQ6ZTB9 187 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 TGIF2LXQ8IUE1 241 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 ZNF645Q8N7E2 425 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 SIGLECL1Q8N7X8 197 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 PIPOXQ9P0Z9 390 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 MINOS1-NBL1R4GNA1 71 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 IGHV1-3A0A0C4DH29 117 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 A0A1W2PPI3 338 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 ITGB1BP1O14713 200 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 TIMM23O14925 209 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 TCRBP04435 133 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 CEACAM3P40198 252 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 MECP2P51608 486 aaKnown RBP11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 MALSU1Q96EH3 234 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 S1PR3Q99500 378 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 PRRT1Q99946 306 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 NEURL2Q9BR09 285 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 DPAGT1Q9H3H5 408 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 SCP2D1Q9UJQ7 156 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 FLVCR2Q9UPI3 526 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 VSIG4Q9Y279 399 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 NUBP2Q9Y5Y2 271 aa11.37□□□□□ -0.59
CHRNA1-204ENST00000409323 NSD1Q96L73 2696 aaPredicted RBP11.36□□□□□ -0.59
CHRNA1-204ENST00000409323 hCG_2014768A0A024R1R8 64 aa11.36□□□□□ -0.59
CHRNA1-204ENST00000409323 LINC00473A8K010 186 aa11.36□□□□□ -0.59
CHRNA1-204ENST00000409323 GAPDHP04406 335 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-204ENST00000409323 RLN1P04808 185 aa11.36□□□□□ -0.59
CHRNA1-204ENST00000409323 FBP1P09467 338 aa11.36□□□□□ -0.59
CHRNA1-204ENST00000409323 CT45A6P0DMU7 189 aa11.36□□□□□ -0.59
CHRNA1-204ENST00000409323 CT45A5P0DMU8 189 aa11.36□□□□□ -0.59
CHRNA1-204ENST00000409323 CT45A7P0DMV0 189 aa11.36□□□□□ -0.59
CHRNA1-204ENST00000409323 RPL30P62888 115 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-204ENST00000409323 SRSF2Q01130 221 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-204ENST00000409323 LY6EQ16553 131 aa11.36□□□□□ -0.59
CHRNA1-204ENST00000409323 OR51H1Q8NH63 302 aa11.36□□□□□ -0.59
CHRNA1-204ENST00000409323 SSX3Q99909 188 aa11.36□□□□□ -0.59
CHRNA1-204ENST00000409323 PEX14O75381 377 aa11.35□□□□□ -0.59
CHRNA1-204ENST00000409323 CRLF1O75462 422 aa11.35□□□□□ -0.59
CHRNA1-204ENST00000409323 ZNF137PP52743 207 aa11.35□□□□□ -0.59
CHRNA1-204ENST00000409323 HNF4GQ14541 408 aa11.35□□□□□ -0.59
CHRNA1-204ENST00000409323 TMED4Q7Z7H5 227 aa11.35□□□□□ -0.59
CHRNA1-204ENST00000409323 ZNF383Q8NA42 475 aa11.35□□□□□ -0.59
CHRNA1-204ENST00000409323 ADAD2Q8NCV1 583 aaKnown RBP11.35□□□□□ -0.59
CHRNA1-204ENST00000409323 NABP2Q9BQ15 211 aa11.35□□□□□ -0.59
CHRNA1-204ENST00000409323 BEX1Q9HBH7 125 aa11.35□□□□□ -0.59
CHRNA1-204ENST00000409323 SLC2A8Q9NY64 477 aa11.35□□□□□ -0.59
CHRNA1-204ENST00000409323 MXRA5Q9NR99 2828 aa11.35□□□□□ -0.59
CHRNA1-204ENST00000409323 A0A0B4J293 547 aa11.34□□□□□ -0.59
CHRNA1-204ENST00000409323 H3BUX3 64 aa11.34□□□□□ -0.59
CHRNA1-204ENST00000409323 GPR31O00270 319 aa11.34□□□□□ -0.59
CHRNA1-204ENST00000409323 IGHV4-59P01825 116 aa11.34□□□□□ -0.59
CHRNA1-204ENST00000409323 ZNF816Q0VGE8 651 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms