RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 C1QL4Q86Z23 238 aa7.07□□□□□ -1.28
SNX13-201ENST00000409076 ABHD12Q8N2K0 398 aa7.07□□□□□ -1.28
SNX13-201ENST00000409076 SLC25A40Q8TBP6 338 aa7.07□□□□□ -1.28
SNX13-201ENST00000409076 SAP25Q8TEE9 199 aa7.07□□□□□ -1.28
SNX13-201ENST00000409076 OR5P3Q8WZ94 311 aa7.07□□□□□ -1.28
SNX13-201ENST00000409076 RND1Q92730 232 aa7.07□□□□□ -1.28
SNX13-201ENST00000409076 TMEM54Q969K7 222 aa7.07□□□□□ -1.28
SNX13-201ENST00000409076 MISP3Q96FF7 219 aa7.07□□□□□ -1.28
SNX13-201ENST00000409076 WDYHV1Q96HA8 205 aa7.07□□□□□ -1.28
SNX13-201ENST00000409076 METRNQ9UJH8 293 aa7.07□□□□□ -1.28
SNX13-201ENST00000409076 C17orf98A8MV24 154 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 C11orf94C9JXX5 98 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 SPRY3O43610 288 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 CST2P09228 141 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 OR4A8P0C604 315 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 DDTP30046 118 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 SRD5A2P31213 254 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 REG1BP48304 166 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 IL15RAQ13261 267 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 PARLQ9H300 379 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 NAV3Q8IVL0 2385 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 A0A1B0GTQ1 180 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 NAPSAO96009 420 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 GYPAP02724 150 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 ZNF90Q03938 601 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 MIC13Q5XKP0 118 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 MRPL54Q6P161 138 aaKnown RBP7.06□□□□□ -1.28
SNX13-201ENST00000409076 C6orf15Q6UXA7 325 aaPredicted RBP7.06□□□□□ -1.28
SNX13-201ENST00000409076 DRAM1Q8N682 238 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 OR2Z1Q8NG97 314 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 OR4X1Q8NH49 305 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 RAB24Q969Q5 203 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 BTF3L4Q96K17 158 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 ANGPTL4Q9BY76 406 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 ZDHHC11Q9H8X9 412 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 FOXJ2Q9P0K8 574 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 ZNRD1Q9P1U0 126 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 ZNF391Q9UJN7 358 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 TRAPPC1Q9Y5R8 145 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 TRAV24A0A0B4J272 114 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 SEC14L6B5MCN3 397 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 HOXA5P20719 270 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 CRYGSP22914 178 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 CBLN1P23435 193 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 MEOX1P50221 254 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 GNG3P63215 75 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 OR5I1Q13606 314 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 KMT5CQ86Y97 462 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 OR10A7Q8NGE5 316 aa7.06□□□□□ -1.28
SNX13-201ENST00000409076 APOBEC3DQ96AK3 386 aaPredicted RBP7.06□□□□□ -1.28
SNX13-201ENST00000409076 SMG1Q96Q15 3661 aaKnown RBP7.06□□□□□ -1.28
SNX13-201ENST00000409076 MDFIC2A0A1B0GVS7 189 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 ZNF716A6NP11 495 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 CDS2O95674 445 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 IGKV1D-33P01593 117 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 IGKV1-33P01594 117 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 OTX1P32242 354 aaPredicted RBP7.05□□□□□ -1.28
SNX13-201ENST00000409076 RPL30P62888 115 aaKnown RBP7.05□□□□□ -1.28
SNX13-201ENST00000409076 HIST1H3AP68431 136 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 SRPXP78539 464 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 TMEM211Q6ICI0 200 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 GGNQ86UU5 652 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 ZCCHC24Q8N2G6 241 aaKnown RBP7.05□□□□□ -1.28
SNX13-201ENST00000409076 TMEM256Q8N2U0 113 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 TMEM251Q8N6I4 163 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 FADS6Q8N9I5 356 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 VN1R17PQ8TDU5 208 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 FAM216AQ8WUB2 273 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 RNF122Q9H9V4 155 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 CUL9Q8IWT3 2517 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 LRP5LA4QPB2 252 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 FAM157AC9JC47 383 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 GATCO43716 136 aaKnown RBP7.05□□□□□ -1.28
SNX13-201ENST00000409076 OR7C2O60412 319 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 CCL1P22362 96 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 TFPI2P48307 235 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 FGF12P61328 243 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 ZNF726P1Q15940 193 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 RPL39P5Q59GN2 51 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 TMEM164Q5U3C3 297 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 MRPL14Q6P1L8 145 aaKnown RBP7.05□□□□□ -1.28
SNX13-201ENST00000409076 PPP1R32Q7Z5V6 425 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 OR4A16Q8NH70 328 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 DTD1Q8TEA8 209 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 GALNT14Q96FL9 552 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 TWSG1Q9GZX9 223 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 PLEKHA3Q9HB20 300 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 TMEM9BQ9NQ34 198 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 ABI3Q9P2A4 366 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 CPAMD8Q8IZJ3 1885 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 COL12A1Q99715 3063 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 LOC102723971A0A1B0GUV8 181 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 IGKV1-5P01602 117 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 ZNF25P17030 456 aaPredicted RBP7.05□□□□□ -1.28
SNX13-201ENST00000409076 GNB2P62879 340 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 IL24Q13007 206 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 C10orf128Q5T292 105 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 DPPA3Q6W0C5 159 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 ZNF573Q86YE8 665 aa7.05□□□□□ -1.28
SNX13-201ENST00000409076 SCCPDHQ8NBX0 429 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms