RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 KRASP01116 189 aa20.45■□□□□ 0.86
DNMT3A-206ENST00000406659 G6PCP35575 357 aa20.45■□□□□ 0.86
DNMT3A-206ENST00000406659 SWI5Q1ZZU3 235 aa20.45■□□□□ 0.86
DNMT3A-206ENST00000406659 C17orf58Q2M2W7 97 aa20.45■□□□□ 0.86
DNMT3A-206ENST00000406659 TUSC1Q2TAM9 212 aa20.45■□□□□ 0.86
DNMT3A-206ENST00000406659 NEUROG1Q92886 237 aa20.45■□□□□ 0.86
DNMT3A-206ENST00000406659 HRH4Q9H3N8 390 aa20.45■□□□□ 0.86
DNMT3A-206ENST00000406659 CLN8Q9UBY8 286 aa20.45■□□□□ 0.86
DNMT3A-206ENST00000406659 RAI1Q7Z5J4 1906 aaPredicted RBP20.45■□□□□ 0.86
DNMT3A-206ENST00000406659 CLDN14O95500 239 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 SPP1P10451 314 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 DYNLT3P51808 116 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 KDF1Q8NAX2 398 aaPredicted RBP20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 HSD17B11Q8NBQ5 300 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 BPIFCQ8NFQ6 507 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 OR5C1Q8NGR4 320 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 LINC01560Q8TB33 94 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 COA4Q9NYJ1 87 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 LINC00473A8K010 186 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 TOR1AO14656 332 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 APOBEC3AP31941 199 aaPredicted RBP20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 BRWD1-AS2P59051 145 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 IL34Q6ZMJ4 242 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 STX12Q86Y82 276 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 ODF3L1Q8IXM7 274 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 CD300LFQ8TDQ1 290 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 NUP50Q9UKX7 468 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 LAMP3Q9UQV4 416 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 WSB1Q9Y6I7 421 aa20.44■□□□□ 0.86
DNMT3A-206ENST00000406659 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.43■□□□□ 0.86
DNMT3A-206ENST00000406659 FAM90A26D6RGX4 464 aa20.43■□□□□ 0.86
DNMT3A-206ENST00000406659 IAPPP10997 89 aa20.43■□□□□ 0.86
DNMT3A-206ENST00000406659 TMEM217Q8N7C4 229 aa20.43■□□□□ 0.86
DNMT3A-206ENST00000406659 LRRC46Q96FV0 321 aa20.43■□□□□ 0.86
DNMT3A-206ENST00000406659 MS4A5Q9H3V2 200 aa20.43■□□□□ 0.86
DNMT3A-206ENST00000406659 PARP11Q9NR21 331 aa20.43■□□□□ 0.86
DNMT3A-206ENST00000406659 GFOD1Q9NXC2 390 aa20.43■□□□□ 0.86
DNMT3A-206ENST00000406659 POLEQ07864 2286 aa20.42■□□□□ 0.86
DNMT3A-206ENST00000406659 TMEM178BH3BS89 294 aa20.42■□□□□ 0.86
DNMT3A-206ENST00000406659 TXNL1O43396 289 aa20.42■□□□□ 0.86
DNMT3A-206ENST00000406659 IGHV3-7P01780 117 aa20.42■□□□□ 0.86
DNMT3A-206ENST00000406659 NARS2Q96I59 477 aaKnown RBP20.42■□□□□ 0.86
DNMT3A-206ENST00000406659 NARFLQ9H6Q4 476 aa20.42■□□□□ 0.86
DNMT3A-206ENST00000406659 PSENENQ9NZ42 101 aa20.42■□□□□ 0.86
DNMT3A-206ENST00000406659 PPIAL4EA0A075B759 164 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 PPIAL4DF5H284 164 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 ITGB1BP1O14713 200 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 TMPRSS2O15393 492 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 SCO1O75880 301 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 CRYZL1O95825 349 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 PPIAL4FP0DN26 164 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 DUTP33316 252 aaKnown RBP20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 RAB7AP51149 207 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 PJVKQ0ZLH3 352 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 ZNF295-AS1Q8N0V1 137 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 STPG2Q8N412 459 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 ZCCHC14Q8WYQ9 949 aaKnown RBP20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 CCL17Q92583 94 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 SH3BGRL3Q9H299 93 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 KCNJ16Q9NPI9 418 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 PPIAL4AQ9Y536 164 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 ZNF729A6NN14 1252 aaPredicted RBP20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 H3BP45 60 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 M0R1X1 148 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 P0C879 139 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 NDUFB7P17568 137 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 SULT1A1P50225 295 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 ZNF134P52741 427 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 LINC00205P59089 165 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 NCR3LG1Q68D85 454 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 Q6ZRG5 221 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 CORO2AQ92828 525 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 SPTA1P02549 2419 aa20.41■□□□□ 0.86
DNMT3A-206ENST00000406659 RAB29O14966 203 aa20.4■□□□□ 0.86
DNMT3A-206ENST00000406659 DANCRP0C864 163 aa20.4■□□□□ 0.86
DNMT3A-206ENST00000406659 TAS2R30P59541 319 aa20.4■□□□□ 0.86
DNMT3A-206ENST00000406659 ADORA2A-AS1P86434 159 aa20.4■□□□□ 0.86
DNMT3A-206ENST00000406659 TMEM267Q0VDI3 215 aaPredicted RBP20.4■□□□□ 0.86
DNMT3A-206ENST00000406659 H2BFWTQ7Z2G1 175 aa20.4■□□□□ 0.86
DNMT3A-206ENST00000406659 ABHD14AQ9BUJ0 271 aa20.4■□□□□ 0.86
DNMT3A-206ENST00000406659 IFI27L2Q9H2X8 130 aa20.4■□□□□ 0.86
DNMT3A-206ENST00000406659 TMEM106BQ9NUM4 274 aa20.4■□□□□ 0.86
DNMT3A-206ENST00000406659 IDI2-AS1Q9NZ38 188 aa20.4■□□□□ 0.86
DNMT3A-206ENST00000406659 hADV38S2A0JD32 116 aa20.39■□□□□ 0.86
DNMT3A-206ENST00000406659 B9A039 149 aa20.39■□□□□ 0.86
DNMT3A-206ENST00000406659 SFTPCP11686 197 aa20.39■□□□□ 0.86
DNMT3A-206ENST00000406659 GRNP28799 593 aaKnown RBP20.39■□□□□ 0.86
DNMT3A-206ENST00000406659 RAB5CP51148 216 aa20.39■□□□□ 0.86
DNMT3A-206ENST00000406659 UBE2KP61086 200 aa20.39■□□□□ 0.86
DNMT3A-206ENST00000406659 TNFRSF9Q07011 255 aa20.39■□□□□ 0.86
DNMT3A-206ENST00000406659 EFNB3Q15768 340 aa20.39■□□□□ 0.86
DNMT3A-206ENST00000406659 BTNL8Q6UX41 500 aa20.39■□□□□ 0.86
DNMT3A-206ENST00000406659 LEAP2Q969E1 77 aa20.39■□□□□ 0.86
DNMT3A-206ENST00000406659 ATP5SQ99766 215 aa20.39■□□□□ 0.86
DNMT3A-206ENST00000406659 USF3Q68DE3 2245 aa20.39■□□□□ 0.85
DNMT3A-206ENST00000406659 PROP1O75360 226 aa20.39■□□□□ 0.85
DNMT3A-206ENST00000406659 NFYBP25208 207 aa20.39■□□□□ 0.85
DNMT3A-206ENST00000406659 F2RL1P55085 397 aa20.39■□□□□ 0.85
DNMT3A-206ENST00000406659 RPL39P5Q59GN2 51 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms