RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 SPRR3Q9UBC9 169 aa13.23□□□□□ -0.29
TOM1-203ENST00000404284 KCNS2Q9ULS6 477 aa13.23□□□□□ -0.29
TOM1-203ENST00000404284 KLRC4-KLRK1H3BQV0 150 aa13.23□□□□□ -0.29
TOM1-203ENST00000404284 CRYABP02511 175 aaKnown RBP13.23□□□□□ -0.29
TOM1-203ENST00000404284 ERVS71-1P61550 626 aa13.23□□□□□ -0.29
TOM1-203ENST00000404284 GAGE1Q13065 139 aa13.23□□□□□ -0.29
TOM1-203ENST00000404284 TBC1D28Q2M2D7 210 aa13.23□□□□□ -0.29
TOM1-203ENST00000404284 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.23□□□□□ -0.29
TOM1-203ENST00000404284 SLC35E3Q7Z769 313 aa13.23□□□□□ -0.29
TOM1-203ENST00000404284 OR10G4Q8NGN3 311 aa13.23□□□□□ -0.29
TOM1-203ENST00000404284 NIPSNAP3BQ9BS92 247 aa13.23□□□□□ -0.29
TOM1-203ENST00000404284 OR2J1Q9GZK6 312 aa13.23□□□□□ -0.29
TOM1-203ENST00000404284 DEFB127Q9H1M4 99 aa13.23□□□□□ -0.29
TOM1-203ENST00000404284 PITPNC1Q9UKF7 332 aa13.23□□□□□ -0.29
TOM1-203ENST00000404284 RNFT1Q5M7Z0 435 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 SAPCD1Q5SSQ6 148 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 NCR3LG1Q68D85 454 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 SSX7Q7RTT5 188 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 DRAM1Q8N682 238 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 GNG13Q9P2W3 67 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 POLDIP2Q9Y2S7 368 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 WIPI2Q9Y4P8 454 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 FRYQ5TBA9 3013 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 GPR179Q6PRD1 2367 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 J3QW42 95 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 WDR1O75083 606 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 RPLP1P05386 114 aaKnown RBP13.22□□□□□ -0.29
TOM1-203ENST00000404284 ZNF16P17020 682 aaPredicted RBP13.22□□□□□ -0.29
TOM1-203ENST00000404284 ZNF146Q15072 292 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 ALKBH6Q3KRA9 238 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 FAM90A2PQ658T7 463 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 PSMG3Q9BT73 122 aaPredicted RBP13.22□□□□□ -0.29
TOM1-203ENST00000404284 ZNF665Q9H7R5 613 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 TMEM9BQ9NQ34 198 aa13.22□□□□□ -0.29
TOM1-203ENST00000404284 RBM7Q9Y580 266 aaKnown RBP13.22□□□□□ -0.29
TOM1-203ENST00000404284 CDIPTO14735 213 aa13.21□□□□□ -0.29
TOM1-203ENST00000404284 CD59P13987 128 aa13.21□□□□□ -0.29
TOM1-203ENST00000404284 PPP1CBP62140 327 aa13.21□□□□□ -0.29
TOM1-203ENST00000404284 TMEM183AQ8IXX5 376 aa13.21□□□□□ -0.29
TOM1-203ENST00000404284 SCGB1C1Q8TD33 95 aa13.21□□□□□ -0.29
TOM1-203ENST00000404284 RNASEH2CQ8TDP1 164 aaKnown RBP13.21□□□□□ -0.29
TOM1-203ENST00000404284 BCL2P10415 239 aa13.21□□□□□ -0.3
TOM1-203ENST00000404284 RPL29P47914 159 aaKnown RBP13.21□□□□□ -0.3
TOM1-203ENST00000404284 LRRC75BQ2VPJ9 315 aa13.21□□□□□ -0.3
TOM1-203ENST00000404284 ZNF787Q6DD87 383 aa13.21□□□□□ -0.3
TOM1-203ENST00000404284 TEX38Q6PEX7 206 aa13.21□□□□□ -0.3
TOM1-203ENST00000404284 MBD3L1Q8WWY6 194 aa13.21□□□□□ -0.3
TOM1-203ENST00000404284 IGHV3-64DA0A0J9YX35 117 aa13.2□□□□□ -0.3
TOM1-203ENST00000404284 NXPH2O95156 264 aa13.2□□□□□ -0.3
TOM1-203ENST00000404284 GLIPR1P48060 266 aa13.2□□□□□ -0.3
TOM1-203ENST00000404284 BTNL3Q6UXE8 466 aa13.2□□□□□ -0.3
TOM1-203ENST00000404284 RCC1LQ96I51 464 aaKnown RBP13.2□□□□□ -0.3
TOM1-203ENST00000404284 CISD1Q9NZ45 108 aaKnown RBP13.2□□□□□ -0.3
TOM1-203ENST00000404284 TGOLN2O43493 480 aa13.2□□□□□ -0.3
TOM1-203ENST00000404284 OR3A1P47881 315 aa13.2□□□□□ -0.3
TOM1-203ENST00000404284 ERVFC1-1P60608 527 aa13.2□□□□□ -0.3
TOM1-203ENST00000404284 PAX5Q02548 391 aa13.2□□□□□ -0.3
TOM1-203ENST00000404284 LCN15Q6UWW0 184 aa13.2□□□□□ -0.3
TOM1-203ENST00000404284 DIRC2Q96SL1 478 aa13.2□□□□□ -0.3
TOM1-203ENST00000404284 KNTC1P50748 2209 aa13.2□□□□□ -0.3
TOM1-203ENST00000404284 TRGV5A0A0B4J1U4 118 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 ZFP92A6NM28 416 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 TCF21O43680 179 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 SELEP16581 610 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 IDH3GP51553 393 aaPredicted RBP13.19□□□□□ -0.3
TOM1-203ENST00000404284 HBG1P69891 147 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 HBG2P69892 147 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 ZNF766Q5HY98 468 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 WDR61Q9GZS3 305 aaKnown RBP13.19□□□□□ -0.3
TOM1-203ENST00000404284 RNF150Q9ULK6 438 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 GTF3C1Q12789 2109 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 KIAA2026Q5HYC2 2103 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 SH2D1BO14796 132 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 PSPNO60542 156 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 CD46P15529 392 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 CEBPDP49716 269 aaPredicted RBP13.19□□□□□ -0.3
TOM1-203ENST00000404284 FGF8P55075 233 aaPredicted RBP13.19□□□□□ -0.3
TOM1-203ENST00000404284 RAB11AP62491 216 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 ACSF3Q4G176 576 aaPredicted RBP13.19□□□□□ -0.3
TOM1-203ENST00000404284 ATP1A1-AS1Q5TC04 95 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 ETFRF1Q6IPR1 90 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 FGFRL1Q8N441 504 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 SLC25A40Q8TBP6 338 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 FER1L6-AS2Q96M78 137 aa13.19□□□□□ -0.3
TOM1-203ENST00000404284 PARD6GQ9BYG4 376 aaPredicted RBP13.19□□□□□ -0.3
TOM1-203ENST00000404284 CHD3Q12873 2000 aaKnown RBP13.18□□□□□ -0.3
TOM1-203ENST00000404284 IQCF6A8MYZ5 107 aa13.18□□□□□ -0.3
TOM1-203ENST00000404284 GCGP01275 180 aa13.18□□□□□ -0.3
TOM1-203ENST00000404284 IGHV1-2P23083 117 aa13.18□□□□□ -0.3
TOM1-203ENST00000404284 SERF2P84101 59 aa13.18□□□□□ -0.3
TOM1-203ENST00000404284 SPANXN5Q5MJ07 72 aa13.18□□□□□ -0.3
TOM1-203ENST00000404284 C5orf30Q96GV9 206 aa13.18□□□□□ -0.3
TOM1-203ENST00000404284 OR4C12Q96R67 309 aa13.18□□□□□ -0.3
TOM1-203ENST00000404284 CDH20Q9HBT6 801 aa13.18□□□□□ -0.3
TOM1-203ENST00000404284 HAND1O96004 215 aa13.18□□□□□ -0.3
TOM1-203ENST00000404284 RAC2P15153 192 aa13.18□□□□□ -0.3
TOM1-203ENST00000404284 LRP11Q86VZ4 500 aa13.18□□□□□ -0.3
TOM1-203ENST00000404284 C1orf87Q8N0U7 546 aa13.18□□□□□ -0.3
TOM1-203ENST00000404284 ZDHHC11Q9H8X9 412 aa13.18□□□□□ -0.3
TOM1-203ENST00000404284 HES4Q9HCC6 221 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms