RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 TXNL1O43396 289 aa9.96□□□□□ -0.82
LINC00339-201ENST00000404210 SAA2P0DJI9 122 aaPredicted RBP9.96□□□□□ -0.82
LINC00339-201ENST00000404210 BTCP35070 178 aa9.96□□□□□ -0.82
LINC00339-201ENST00000404210 DCTN2Q13561 401 aaKnown RBP9.96□□□□□ -0.82
LINC00339-201ENST00000404210 CCDC144NLQ6NUI1 221 aa9.96□□□□□ -0.82
LINC00339-201ENST00000404210 ZNF818PQ6ZRF7 136 aa9.96□□□□□ -0.82
LINC00339-201ENST00000404210 DRAM1Q8N682 238 aa9.96□□□□□ -0.82
LINC00339-201ENST00000404210 BVESQ8NE79 360 aa9.96□□□□□ -0.82
LINC00339-201ENST00000404210 MARCH1Q8TCQ1 289 aa9.96□□□□□ -0.82
LINC00339-201ENST00000404210 RTN4IP1Q8WWV3 396 aaPredicted RBP9.96□□□□□ -0.82
LINC00339-201ENST00000404210 TOMM40LQ969M1 308 aa9.96□□□□□ -0.82
LINC00339-201ENST00000404210 MRGPRFQ96AM1 343 aa9.96□□□□□ -0.82
LINC00339-201ENST00000404210 ZNF486Q96H40 463 aaPredicted RBP9.96□□□□□ -0.82
LINC00339-201ENST00000404210 PRDM13Q9H4Q3 707 aa9.96□□□□□ -0.82
LINC00339-201ENST00000404210 FAM96BQ9Y3D0 163 aa9.96□□□□□ -0.82
LINC00339-201ENST00000404210 A0A0U1RQK1 487 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 CTSDP07339 412 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-201ENST00000404210 PGAM2P15259 253 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 SLC6A1P30531 599 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 CCR6P51684 374 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 SCGB2A2Q13296 93 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 EIF4EBP1Q13541 118 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-201ENST00000404210 DIAPH2-AS1Q14236 149 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 RBMS2Q15434 407 aaKnown RBP9.95□□□□□ -0.82
LINC00339-201ENST00000404210 SSX2Q16385 188 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 RPL39P5Q59GN2 51 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 ZNF66Q6ZN08 573 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 IL17RELQ6ZVW7 336 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 Q71RC1 249 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-201ENST00000404210 TGIF2LXQ8IUE1 241 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 CMTM1Q8IZ96 169 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 BCL6BQ8N143 479 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-201ENST00000404210 OR8H3Q8N146 312 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 DYNAPQ8N1N2 210 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 ZDHHC22Q8N966 263 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 POC5Q8NA72 575 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 C17orf50Q8WW18 174 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 ADTRPQ96IZ2 230 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 DPAGT1Q9H3H5 408 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 COPZ2Q9P299 210 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 HILPDAQ9Y5L2 63 aa9.95□□□□□ -0.82
LINC00339-201ENST00000404210 IGHV1-3A0A0C4DH29 117 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 FAM240BA0A1B0GVZ2 78 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 INAFM1C9JVW0 142 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 NDUFB6O95139 128 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 FBP1P09467 338 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 CT45A6P0DMU7 189 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 CT45A5P0DMU8 189 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 CT45A7P0DMV0 189 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 S100GP29377 79 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 DUTP33316 252 aaKnown RBP9.94□□□□□ -0.82
LINC00339-201ENST00000404210 THBS3P49746 956 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 ARHGDIBP52566 201 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 RND3P61587 244 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 TAGLNQ01995 201 aaKnown RBP9.94□□□□□ -0.82
LINC00339-201ENST00000404210 AANATQ16613 207 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 DUSP18Q8NEJ0 188 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 C5orf30Q96GV9 206 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 HSD17B10Q99714 261 aaKnown RBP9.94□□□□□ -0.82
LINC00339-201ENST00000404210 NABP2Q9BQ15 211 aa9.94□□□□□ -0.82
LINC00339-201ENST00000404210 RTBDNQ9BSG5 229 aaPredicted RBP9.94□□□□□ -0.82
LINC00339-201ENST00000404210 C14orf166Q9Y224 244 aaKnown RBP9.94□□□□□ -0.82
LINC00339-201ENST00000404210 SOX21Q9Y651 276 aaPredicted RBP9.94□□□□□ -0.82
LINC00339-201ENST00000404210 A0A1W2PPI3 338 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 FAM90A9PA6NNJ1 464 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 VGLL3A8MV65 326 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 M0R1X1 148 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 PGLYRP1O75594 196 aaPredicted RBP9.93□□□□□ -0.82
LINC00339-201ENST00000404210 TCRBP04435 133 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 SRD5A1P18405 259 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 CD1BP29016 333 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 BRS3P32247 399 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 MC5RP33032 325 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 REG1BP48304 166 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 DYNLT3P51808 116 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 BAMBIQ13145 260 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 HABP2Q14520 560 aaPredicted RBP9.93□□□□□ -0.82
LINC00339-201ENST00000404210 DEFB112Q30KQ8 113 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 ABCA11PQ4W5N1 156 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 Q6YL49 198 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 MOB3BQ86TA1 216 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 THNSL2Q86YJ6 484 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 OR5AN1Q8NGI8 311 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 C5orf66Q9H5L9 145 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 VSIG4Q9Y279 399 aa9.93□□□□□ -0.82
LINC00339-201ENST00000404210 MPPED1O15442 326 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 CRLF1O75462 422 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 RRASP10301 218 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 PIGPP57054 158 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 CATR1Q13166 79 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 PHLDA2Q53GA4 152 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 DMRTA1Q5VZB9 504 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 TCTEX1D1Q8N7M0 179 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 CCDC71LQ8N9Z2 235 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 ZNF383Q8NA42 475 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 ENKURQ8TC29 256 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 ZFAND2BQ8WV99 257 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 C22orf15Q8WYQ4 148 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 DDB2Q92466 427 aa9.92□□□□□ -0.82
LINC00339-201ENST00000404210 CFHR4Q92496 578 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms