RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 TINAGL1Q9GZM7 467 aaPredicted RBP23.59■■□□□ 1.37
USP42-202ENST00000404008 ANKRD20A5PA0PJZ0 165 aa23.58■■□□□ 1.37
USP42-202ENST00000404008 PROP1O75360 226 aa23.58■■□□□ 1.37
USP42-202ENST00000404008 UBA52P62987 128 aaKnown RBP23.58■■□□□ 1.37
USP42-202ENST00000404008 STEAP1BQ6NZ63 245 aa23.58■■□□□ 1.37
USP42-202ENST00000404008 MOB3BQ86TA1 216 aa23.58■■□□□ 1.37
USP42-202ENST00000404008 GDPD1Q8N9F7 314 aa23.58■■□□□ 1.37
USP42-202ENST00000404008 OR56B4Q8NH76 319 aa23.58■■□□□ 1.37
USP42-202ENST00000404008 ZNF2Q9BSG1 426 aaPredicted RBP23.58■■□□□ 1.37
USP42-202ENST00000404008 MRPL20Q9BYC9 149 aaKnown RBP23.58■■□□□ 1.37
USP42-202ENST00000404008 CHIAQ9BZP6 476 aa23.58■■□□□ 1.37
USP42-202ENST00000404008 SDHAF2Q9NX18 166 aa23.58■■□□□ 1.37
USP42-202ENST00000404008 VPREB3Q9UKI3 123 aa23.58■■□□□ 1.37
USP42-202ENST00000404008 OR4D10Q8NGI6 311 aa23.57■■□□□ 1.36
USP42-202ENST00000404008 OR6F1Q8NGZ6 308 aa23.57■■□□□ 1.36
USP42-202ENST00000404008 C5orf30Q96GV9 206 aa23.57■■□□□ 1.36
USP42-202ENST00000404008 RNASE1P07998 156 aaKnown RBP23.56■■□□□ 1.36
USP42-202ENST00000404008 CD24P25063 80 aa23.56■■□□□ 1.36
USP42-202ENST00000404008 TSPAN5P62079 268 aa23.56■■□□□ 1.36
USP42-202ENST00000404008 SRSF2Q01130 221 aaKnown RBP23.56■■□□□ 1.36
USP42-202ENST00000404008 ZNF645Q8N7E2 425 aa23.56■■□□□ 1.36
USP42-202ENST00000404008 SDHCQ99643 169 aaPredicted RBP23.56■■□□□ 1.36
USP42-202ENST00000404008 NABP2Q9BQ15 211 aa23.56■■□□□ 1.36
USP42-202ENST00000404008 TCF19Q9Y242 345 aa23.56■■□□□ 1.36
USP42-202ENST00000404008 FAM90A9PA6NNJ1 464 aa23.55■■□□□ 1.36
USP42-202ENST00000404008 RAB3DO95716 219 aa23.55■■□□□ 1.36
USP42-202ENST00000404008 HERV-K104P61576 105 aa23.55■■□□□ 1.36
USP42-202ENST00000404008 LY6EQ16553 131 aa23.55■■□□□ 1.36
USP42-202ENST00000404008 MOB3AQ96BX8 217 aa23.55■■□□□ 1.36
USP42-202ENST00000404008 SLC22A5O76082 557 aa23.54■■□□□ 1.36
USP42-202ENST00000404008 IGLV2-14P01704 120 aa23.54■■□□□ 1.36
USP42-202ENST00000404008 IFNA6P05013 189 aa23.54■■□□□ 1.36
USP42-202ENST00000404008 AKAIN1P0CW23 69 aa23.54■■□□□ 1.36
USP42-202ENST00000404008 CT45A6P0DMU7 189 aa23.54■■□□□ 1.36
USP42-202ENST00000404008 CT45A5P0DMU8 189 aa23.54■■□□□ 1.36
USP42-202ENST00000404008 CT45A7P0DMV0 189 aa23.54■■□□□ 1.36
USP42-202ENST00000404008 FXYD4P59646 89 aa23.54■■□□□ 1.36
USP42-202ENST00000404008 LSAMPQ13449 338 aa23.54■■□□□ 1.36
USP42-202ENST00000404008 ARRDC1Q8N5I2 433 aa23.54■■□□□ 1.36
USP42-202ENST00000404008 SECTM1Q8WVN6 248 aa23.54■■□□□ 1.36
USP42-202ENST00000404008 S100ZQ8WXG8 99 aa23.54■■□□□ 1.36
USP42-202ENST00000404008 IGHV3-72A0A0B4J1Y9 119 aa23.53■■□□□ 1.36
USP42-202ENST00000404008 A6NDX4 124 aa23.53■■□□□ 1.36
USP42-202ENST00000404008 SNRNP70P08621 437 aaKnown RBP23.53■■□□□ 1.36
USP42-202ENST00000404008 MEF2DQ14814 521 aa23.53■■□□□ 1.36
USP42-202ENST00000404008 FBLN7Q53RD9 439 aa23.53■■□□□ 1.36
USP42-202ENST00000404008 THNSL2Q86YJ6 484 aa23.53■■□□□ 1.36
USP42-202ENST00000404008 CAPSLQ8WWF8 208 aa23.53■■□□□ 1.36
USP42-202ENST00000404008 TRIM77I1YAP6 450 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 M0R1X1 148 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 FAM106CPP0CH98 169 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 CD1BP29016 333 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 RIPPLY3P57055 190 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 KLF9Q13886 244 aaPredicted RBP23.52■■□□□ 1.36
USP42-202ENST00000404008 BAK1Q16611 211 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 FAAP20Q6NZ36 180 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 CCBE1Q6UXH8 406 aaPredicted RBP23.52■■□□□ 1.36
USP42-202ENST00000404008 TMEM17Q86X19 198 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 DRAXINQ8NBI3 349 aaPredicted RBP23.52■■□□□ 1.36
USP42-202ENST00000404008 OR4C16Q8NGL9 310 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 SLC5A7Q9GZV3 580 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 FXYD6Q9H0Q3 95 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 PITPNC1Q9UKF7 332 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 C2CD3Q4AC94 2353 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 MSMO1Q15800 293 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 LIAT1Q6ZQX7 453 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 CCL28Q9NRJ3 127 aa23.52■■□□□ 1.36
USP42-202ENST00000404008 IGKV1D-33P01593 117 aa23.51■■□□□ 1.35
USP42-202ENST00000404008 IGKV1-33P01594 117 aa23.51■■□□□ 1.35
USP42-202ENST00000404008 AMY2AP04746 511 aa23.51■■□□□ 1.35
USP42-202ENST00000404008 ZNF735P0CB33 412 aa23.51■■□□□ 1.35
USP42-202ENST00000404008 AADACL3Q5VUY0 350 aa23.51■■□□□ 1.35
USP42-202ENST00000404008 C16orf87Q6PH81 154 aa23.51■■□□□ 1.35
USP42-202ENST00000404008 GLDNQ6ZMI3 551 aaPredicted RBP23.51■■□□□ 1.35
USP42-202ENST00000404008 LHFPL1Q86WI0 220 aa23.51■■□□□ 1.35
USP42-202ENST00000404008 TMEM219Q86XT9 240 aa23.51■■□□□ 1.35
USP42-202ENST00000404008 TOMM5Q8N4H5 51 aa23.51■■□□□ 1.35
USP42-202ENST00000404008 OR5H14A6NHG9 310 aa23.5■■□□□ 1.35
USP42-202ENST00000404008 GPR137BO60478 399 aa23.5■■□□□ 1.35
USP42-202ENST00000404008 LINC00205P59089 165 aa23.5■■□□□ 1.35
USP42-202ENST00000404008 AP3S2P59780 193 aa23.5■■□□□ 1.35
USP42-202ENST00000404008 EBI3Q14213 229 aa23.5■■□□□ 1.35
USP42-202ENST00000404008 OR5AN1Q8NGI8 311 aa23.5■■□□□ 1.35
USP42-202ENST00000404008 ZFAND2BQ8WV99 257 aa23.5■■□□□ 1.35
USP42-202ENST00000404008 H0YJW9 148 aa23.49■■□□□ 1.35
USP42-202ENST00000404008 CHST1O43916 411 aa23.49■■□□□ 1.35
USP42-202ENST00000404008 EIF4EBP1Q13541 118 aaPredicted RBP23.49■■□□□ 1.35
USP42-202ENST00000404008 HES1Q14469 280 aa23.49■■□□□ 1.35
USP42-202ENST00000404008 TRIQKQ629K1 86 aa23.49■■□□□ 1.35
USP42-202ENST00000404008 ZNF383Q8NA42 475 aa23.49■■□□□ 1.35
USP42-202ENST00000404008 DISC1C4P0D8 188 aa23.48■■□□□ 1.35
USP42-202ENST00000404008 GNRHRP30968 328 aa23.48■■□□□ 1.35
USP42-202ENST00000404008 DUTP33316 252 aaKnown RBP23.48■■□□□ 1.35
USP42-202ENST00000404008 ZNF818PQ6ZRF7 136 aa23.48■■□□□ 1.35
USP42-202ENST00000404008 RBMXL1Q96E39 390 aaKnown RBP23.48■■□□□ 1.35
USP42-202ENST00000404008 EAF1Q96JC9 268 aaPredicted RBP23.48■■□□□ 1.35
USP42-202ENST00000404008 FBN1P35555 2871 aaKnown RBP23.47■■□□□ 1.35
USP42-202ENST00000404008 ATRQ13535 2644 aa23.47■■□□□ 1.35
USP42-202ENST00000404008 FAM181BA6NEQ2 426 aa23.47■■□□□ 1.35
USP42-202ENST00000404008 IL7P13232 177 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms