RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 LRP11Q86VZ4 500 aa10.1□□□□□ -0.79
RBM39-206ENST00000403542 DCTN5Q9BTE1 182 aa10.1□□□□□ -0.79
RBM39-206ENST00000403542 B4GALT7Q9UBV7 327 aa10.1□□□□□ -0.79
RBM39-206ENST00000403542 IL17BQ9UHF5 180 aa10.1□□□□□ -0.79
RBM39-206ENST00000403542 A0A0U1RQK1 487 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 C1QTNF9BB2RNN3 333 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 DUSP3P51452 185 aaPredicted RBP10.09□□□□□ -0.79
RBM39-206ENST00000403542 FAM3BP58499 235 aaPredicted RBP10.09□□□□□ -0.79
RBM39-206ENST00000403542 MRGPRDQ8TDS7 321 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 TMEM45BQ96B21 275 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 CACNA1HO95180 2353 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 SMCO3A2RU48 225 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 PAGE4O60829 102 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 CYC1P08574 325 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 FGF7P21781 194 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 GABRA2P47869 451 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 MEF2BQ02080 365 aaPredicted RBP10.09□□□□□ -0.79
RBM39-206ENST00000403542 TMEM41BQ5BJD5 291 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 ZNF66Q6ZN08 573 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 ZNF600Q6ZNG1 722 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 LURAP1LQ8IV03 231 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 SAXO1Q8IYX7 474 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 IL22RA2Q969J5 263 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 C14orf144Q96I85 54 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 OBP2BQ9NPH6 170 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 WASF3Q9UPY6 502 aa10.09□□□□□ -0.79
RBM39-206ENST00000403542 TPRP12270 2363 aaKnown RBP10.09□□□□□ -0.79
RBM39-206ENST00000403542 HEATR1Q9H583 2144 aaKnown RBP10.09□□□□□ -0.79
RBM39-206ENST00000403542 IGKV3D-15A0A087WSY6 115 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 A0A1B0GUS0 222 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 C17orf98A8MV24 154 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 C9orf172C9J069 976 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 LAMTOR5O43504 91 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 WISP2O76076 250 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 PTBP3O95758 552 aaKnown RBP10.08□□□□□ -0.8
RBM39-206ENST00000403542 HIST1H1BP16401 226 aaKnown RBP10.08□□□□□ -0.8
RBM39-206ENST00000403542 IL2RGP31785 369 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 SSTR5P35346 364 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 ARR3P36575 388 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 TNFRSF9Q07011 255 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 FFAR4Q5NUL3 377 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 OR10A7Q8NGE5 316 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 OR10G4Q8NGN3 311 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 OR10G9Q8NGN4 311 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 OR10G7Q8NGN6 311 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 C5orf30Q96GV9 206 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 POM121Q96HA1 1249 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 RIMS4Q9H426 269 aaPredicted RBP10.08□□□□□ -0.8
RBM39-206ENST00000403542 LIN7CQ9NUP9 197 aaKnown RBP10.08□□□□□ -0.8
RBM39-206ENST00000403542 J3QT63 122 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 AGFG2O95081 481 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 TRA2AQ13595 282 aaKnown RBP eCLIP10.08□□□□□ -0.82e-11■■■□□ 18.7
RBM39-206ENST00000403542 TMEM241Q24JQ0 296 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 BSXQ3C1V8 233 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 MRGPRGQ86SM5 289 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 PARLQ9H300 379 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 FUT9Q9Y231 359 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 TRAV38-1A0A0B4J264 116 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 ODAMA1E959 279 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 XKRY2A2RUG3 117 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 H7BYZ3 331 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 CER1O95813 267 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 GALR1P47211 349 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 MEOX1P50221 254 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 EDDM3AQ14507 147 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 ZNF497Q6ZNH5 498 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 VKORC1L1Q8N0U8 176 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 METRNQ9UJH8 293 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 MPC1Q9Y5U8 109 aa10.08□□□□□ -0.8
RBM39-206ENST00000403542 A0A087X0M5 115 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 A0A1B0GX30 115 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 A0A1W2PNU3 283 aaPredicted RBP10.07□□□□□ -0.8
RBM39-206ENST00000403542 OR5B21A6NL26 309 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 RPL23P62829 140 aaKnown RBP10.07□□□□□ -0.8
RBM39-206ENST00000403542 ARG2P78540 354 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 PRAMEF6Q5VXH4 476 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 CST9LP1Q5W188 147 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 DERL1Q9BUN8 251 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 GPR87Q9BY21 358 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 ARFGEF3Q5TH69 2177 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 PIEZO2Q9H5I5 2752 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 TRAV1-1A0A0B4J248 108 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 C12orf77C9JDV5 145 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 ST8SIA5O15466 376 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 SNRPCP09234 159 aaKnown RBP10.07□□□□□ -0.8
RBM39-206ENST00000403542 DCAF10Q5QP82 559 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 Q6ZR03 302 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 OR13D1Q8NGV5 346 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 SLC25A40Q8TBP6 338 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 MBD3L1Q8WWY6 194 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 RAB24Q969Q5 203 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 RTL8AQ9BWD3 113 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 LINC00470Q9BZP3 86 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 PATZ1Q9HBE1 687 aaKnown RBP10.07□□□□□ -0.8
RBM39-206ENST00000403542 MSL2Q9HCI7 577 aa10.07□□□□□ -0.8
RBM39-206ENST00000403542 LRP5LA4QPB2 252 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 B4DEV8 164 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 MPV17P39210 176 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 PSMB3P49720 205 aa10.06□□□□□ -0.8
RBM39-206ENST00000403542 EDDM3BP56851 147 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms