RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 ID3Q02535 119 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 LBHQ53QV2 105 aaPredicted RBP11.94□□□□□ -0.5
ATG3-202ENST00000402314 RNFT1Q5M7Z0 435 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 FAM78BQ5VT40 261 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.94□□□□□ -0.5
ATG3-202ENST00000402314 SNIP1Q8TAD8 396 aaKnown RBP11.94□□□□□ -0.5
ATG3-202ENST00000402314 CISD1Q9NZ45 108 aaKnown RBP11.94□□□□□ -0.5
ATG3-202ENST00000402314 CACNG5Q9UF02 275 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 RIF1Q5UIP0 2472 aaKnown RBP11.94□□□□□ -0.5
ATG3-202ENST00000402314 COL27A1Q8IZC6 1860 aaPredicted RBP11.94□□□□□ -0.5
ATG3-202ENST00000402314 SLC22A20A6NK97 555 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 CD300LBA8K4G0 201 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 IGKV1D-33P01593 117 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 IGKV1-33P01594 117 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 PAX1P15863 534 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 COL8A2P25067 703 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 MEOX1P50221 254 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 UBE2G2P60604 165 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 TMEM211Q6ICI0 200 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 TOMM20LQ6UXN7 152 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 TMEM45BQ96B21 275 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 B4GALT7Q9UBV7 327 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 ZNF391Q9UJN7 358 aa11.94□□□□□ -0.5
ATG3-202ENST00000402314 SPINK9Q5DT21 86 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 H1FOOQ8IZA3 346 aaPredicted RBP11.93□□□□□ -0.5
ATG3-202ENST00000402314 ZNF295-AS1Q8N0V1 137 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 OR10V1Q8NGI7 309 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 POM121L2Q96KW2 1035 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 VAX2Q9UIW0 290 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 PPP1R3CQ9UQK1 317 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 ZNF320A2RRD8 509 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 TRAPPC2LH3BP13 241 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 SERPINE2P07093 398 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 CELA3BP08861 270 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 SFTPCP11686 197 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 CD59P13987 128 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 VDAC1P21796 283 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 MDH2P40926 338 aaKnown RBP11.93□□□□□ -0.5
ATG3-202ENST00000402314 PNRC1Q12796 327 aaPredicted RBP11.93□□□□□ -0.5
ATG3-202ENST00000402314 NMSQ5H8A3 153 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 PARLQ9H300 379 aa11.93□□□□□ -0.5
ATG3-202ENST00000402314 RBM7Q9Y580 266 aaKnown RBP11.93□□□□□ -0.5
ATG3-202ENST00000402314 CADP27708 2225 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 MARCH11A6NNE9 402 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 TGOLN2O43493 480 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 TNFSF15O95150 251 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 GCH1P30793 250 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 IQCJQ1A5X6 159 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 CEACAM21Q3KPI0 293 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 MCEMP1Q8IX19 187 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 MS4A10Q96PG2 267 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 OR4C12Q96R67 309 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 PSENENQ9NZ42 101 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 RNF115Q9Y4L5 304 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 KIAA1324LA8MWY0 1029 aaPredicted RBP11.92□□□□□ -0.5
ATG3-202ENST00000402314 CDX4O14627 284 aaPredicted RBP11.92□□□□□ -0.5
ATG3-202ENST00000402314 GCGP01275 180 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 ERVFC1-1P60608 527 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 FGF12P61328 243 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 GCNT2Q8N0V5 402 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 RPP25LQ8N5L8 163 aaKnown RBP11.92□□□□□ -0.5
ATG3-202ENST00000402314 BEND2Q8NDZ0 799 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 MRPL30Q8TCC3 161 aaKnown RBP11.92□□□□□ -0.5
ATG3-202ENST00000402314 APOBEC3DQ96AK3 386 aaPredicted RBP11.92□□□□□ -0.5
ATG3-202ENST00000402314 IMMP2LQ96T52 175 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 MRPS18CQ9Y3D5 142 aaKnown RBP11.92□□□□□ -0.5
ATG3-202ENST00000402314 OR3A1P47881 315 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 IL24Q13007 206 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 SRSF6Q13247 344 aaKnown RBP11.92□□□□□ -0.5
ATG3-202ENST00000402314 SP5Q6BEB4 398 aaPredicted RBP11.92□□□□□ -0.5
ATG3-202ENST00000402314 HAPLN4Q86UW8 402 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 MKXQ8IYA7 352 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 OR2T10Q8NGZ9 312 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 OR51I2Q9H344 312 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 PATZ1Q9HBE1 687 aaKnown RBP11.92□□□□□ -0.5
ATG3-202ENST00000402314 NAT8Q9UHE5 227 aa11.92□□□□□ -0.5
ATG3-202ENST00000402314 NAPSAO96009 420 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 MEF2BQ02080 365 aaPredicted RBP11.91□□□□□ -0.5
ATG3-202ENST00000402314 OR5I1Q13606 314 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 ALKBH6Q3KRA9 238 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 ARSJQ5FYB0 599 aaPredicted RBP11.91□□□□□ -0.5
ATG3-202ENST00000402314 TMEM164Q5U3C3 297 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 OR10J5Q8NHC4 309 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 RNASEH2CQ8TDP1 164 aaKnown RBP11.91□□□□□ -0.5
ATG3-202ENST00000402314 ERRFI1Q9UJM3 462 aaPredicted RBP11.91□□□□□ -0.5
ATG3-202ENST00000402314 TCF21O43680 179 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 PAGE4O60829 102 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 MT-CO3P00414 261 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 HPRT1P00492 218 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 RAB4BP61018 213 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 DTD1Q8TEA8 209 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 TMEM56Q96MV1 263 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 DERL1Q9BUN8 251 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 PARD6AQ9NPB6 346 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 NAGKQ9UJ70 344 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 TMEM56-RWDD3S4R434 201 aa11.91□□□□□ -0.5
ATG3-202ENST00000402314 PGLYRP1O75594 196 aaPredicted RBP11.9□□□□□ -0.5
ATG3-202ENST00000402314 SP9P0CG40 484 aa11.9□□□□□ -0.5
ATG3-202ENST00000402314 PLP2Q04941 152 aa11.9□□□□□ -0.5
ATG3-202ENST00000402314 Q6ZVH6 145 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms