RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 COX14Q96I36 57 aa8.37□□□□□ -1.07
CSMD1-202ENST00000400186 SLC25A10Q9UBX3 287 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-202ENST00000400186 RUNX1Q01196 453 aa8.37□□□□□ -1.07
CSMD1-202ENST00000400186 ROM1Q03395 351 aa8.37□□□□□ -1.07
CSMD1-202ENST00000400186 HDHD3Q9BSH5 251 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-202ENST00000400186 UBTD1Q9HAC8 227 aa8.37□□□□□ -1.07
CSMD1-202ENST00000400186 GPR35Q9HC97 309 aa8.37□□□□□ -1.07
CSMD1-202ENST00000400186 TSPAN13O95857 204 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 VSIG10L2P0DP72 767 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 OR2Y1Q8NGV0 311 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 KCNK7Q9Y2U2 307 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 CELA2BP08218 269 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-202ENST00000400186 FOLR2P14207 255 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 LRRC75BQ2VPJ9 315 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 CT55Q8WUE5 264 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 RNF7Q9UBF6 113 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 DSPPQ9NZW4 1301 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 CEACAM18A8MTB9 384 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 ARL14EPLP0DKL9 152 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 OTX1P32242 354 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-202ENST00000400186 LEMD1Q68G75 181 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 TMEM136Q6ZRR5 245 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 PGLYRP4Q96LB8 373 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 ZNF665Q9H7R5 613 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 CSPG4Q6UVK1 2322 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 EMP1P54849 157 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 ERVFRD-1P60508 538 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 RPL31P62899 125 aaKnown RBP8.36□□□□□ -1.07
CSMD1-202ENST00000400186 HERPUD1Q15011 391 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 CRISPLD2Q9H0B8 497 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 PHLDA3Q9Y5J5 127 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 MGAMO43451 1857 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 FOXC1Q12948 553 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 GMPPAQ96IJ6 420 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-202ENST00000400186 GPA33Q99795 319 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 TRAV39A0A0B4J263 110 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 VAX1Q5SQQ9 334 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 OR10J6PQ8NGY7 276 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 TMEM222Q9H0R3 208 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 GREB1LQ9C091 1923 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-202ENST00000400186 COL5A3P25940 1745 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-202ENST00000400186 HRKO00198 91 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 REG1BP48304 166 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 TEX30Q5JUR7 227 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 FAM53AQ6NSI3 398 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-202ENST00000400186 CHRNA10Q9GZZ6 450 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 MRPL18Q9H0U6 180 aaKnown RBP8.36□□□□□ -1.07
CSMD1-202ENST00000400186 MOB4Q9Y3A3 225 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 C7orf66A4D0T2 115 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 ZIC1Q15915 447 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 TMEM78Q5T7P6 136 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 RHBDD2Q6NTF9 364 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 RND1Q92730 232 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 TUBD1Q9UJT1 453 aa8.36□□□□□ -1.07
CSMD1-202ENST00000400186 SOD3P08294 240 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 C1QTNF12Q5T7M4 302 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 OR8G5Q8NG78 346 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 TXNDC17Q9BRA2 123 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 MPDU1O75352 247 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 FCGR3AP08637 254 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 OR4A5Q8NH83 315 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 ABHD14BQ96IU4 210 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 TCFL5Q9UL49 500 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 ANAPC1Q9H1A4 1944 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 LNP1A1A4G5 178 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 HSPB1P04792 205 aaKnown RBP8.35□□□□□ -1.07
CSMD1-202ENST00000400186 CIRBPQ14011 172 aaKnown RBP8.35□□□□□ -1.07
CSMD1-202ENST00000400186 TMEM45BQ96B21 275 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 UCN2Q96RP3 112 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 OR5AC2Q9NZP5 309 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 MRPS18BQ9Y676 258 aaKnown RBP8.35□□□□□ -1.07
CSMD1-202ENST00000400186 EML2O95834 649 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 LGALS3P17931 250 aaKnown RBP8.35□□□□□ -1.07
CSMD1-202ENST00000400186 MAGEA5P43359 124 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 C16orf92Q96LL3 132 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 MAP1LC3AQ9H492 121 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 ZNF273Q14593 569 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 NMBP08949 121 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 NUDT16L1Q9BRJ7 211 aaKnown RBP8.35□□□□□ -1.07
CSMD1-202ENST00000400186 LEPROTL1O95214 131 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 WFDC3Q8IUB2 231 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 TGIF2-C20orf24A0A0A6YYL0 155 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 DIRC2Q96SL1 478 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 LHX9Q9NQ69 397 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 MRPS16Q9Y3D3 137 aaKnown RBP8.35□□□□□ -1.07
CSMD1-202ENST00000400186 RBFOX2O43251 390 aaKnown RBP eCLIP8.35□□□□□ -1.07
CSMD1-202ENST00000400186 C1QL1O75973 258 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 HPRT1P00492 218 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 NEU1Q99519 415 aa8.35□□□□□ -1.07
CSMD1-202ENST00000400186 AGFG2O95081 481 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 DNAL4O96015 105 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 COL10A1Q03692 680 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 C2orf83Q53S99 150 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 SCNM1Q9BWG6 230 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 HEXA-AS1Q9H8Q6 139 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 A0A0U1RQV5 110 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 HLA-DRB1P01911 266 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 BGLAPP02818 100 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 PRSS2P07478 247 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 NPBWR2P48146 333 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms