RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 GLDNQ6ZMI3 551 aaPredicted RBP9.63□□□□□ -0.87
SKA3-203ENST00000400018 SLC36A1Q7Z2H8 476 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 ZNF561Q8N587 486 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 TSNAXQ99598 290 aaKnown RBP9.63□□□□□ -0.87
SKA3-203ENST00000400018 TAS2R3Q9NYW6 316 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 GNG12Q9UBI6 72 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 OVOL3O00110 214 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 NDUFB3O43676 98 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 TUSC2O75896 110 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 C4BPBP20851 252 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 TAS2R46P59540 309 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 DEFA6Q01524 100 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 DHRS2Q13268 280 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 FAM189A2Q15884 450 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 GUCA2BQ16661 112 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 SSX9Q7RTT3 188 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 LHFPL1Q86WI0 220 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 RXFP4Q8TDU9 374 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 MBNL3Q9NUK0 354 aaKnown RBP9.62□□□□□ -0.87
SKA3-203ENST00000400018 RASL12Q9NYN1 266 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 CALYQ9NYX4 217 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 OTOGQ6ZRI0 2925 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 IGHV4-61A0A0C4DH41 118 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 IFNL4K9M1U5 179 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 VAX1Q5SQQ9 334 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 SLC35E4Q6ICL7 350 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 ZNF880Q6PDB4 577 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 LINC00596Q86U02 117 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 SLC5A7Q9GZV3 580 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 OR2D2Q9H210 308 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 GPR132Q9UNW8 380 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 IGLV2-14P01704 120 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 ZNF728P0DKX0 622 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 COX7A1P24310 79 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 EFNA4P52798 201 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 AKR1C2P52895 323 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 AKR1C1Q04828 323 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 MEF2DQ14814 521 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 ANKRD55Q3KP44 614 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 GALMQ96C23 342 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 RHOVQ96L33 236 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 PRRT1Q99946 306 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 ARL6Q9H0F7 186 aa9.62□□□□□ -0.87
SKA3-203ENST00000400018 NF1P21359 2839 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 NKX6-3A6NJ46 265 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 ARPC5O15511 151 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 SPDEFO95238 335 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 MDH2P40926 338 aaKnown RBP9.61□□□□□ -0.87
SKA3-203ENST00000400018 HMGN3Q15651 99 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 LRRC37A5PQ49AS3 106 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 AKIRIN2Q53H80 203 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 C11orf87Q6NUJ2 197 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 PEG10Q86TG7 708 aaKnown RBP9.61□□□□□ -0.87
SKA3-203ENST00000400018 DMBX1Q8NFW5 382 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 ERGIC1Q969X5 290 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 TP53RKQ96S44 253 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 KCNIP1Q9NZI2 227 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 ONECUT1Q9UBC0 465 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 CLN8Q9UBY8 286 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 SOX21Q9Y651 276 aaPredicted RBP9.61□□□□□ -0.87
SKA3-203ENST00000400018 BAHCC1Q9P281 2608 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 TRBV6-7A0A0A0MS04 114 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 CLEC18AA5D8T8 446 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 FAM157AC9JC47 383 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 PROP1O75360 226 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 HOXB5P09067 269 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 S100A11P31949 105 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 PCP4P48539 62 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 HERV-K104P61576 105 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 ANKRD39Q53RE8 183 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 CLEC18BQ6UXF7 455 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 CLEC18CQ8NCF0 446 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 SUCNR1Q9BXA5 334 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 CHODLQ9H9P2 273 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 MYOZ1Q9NP98 299 aaPredicted RBP9.61□□□□□ -0.87
SKA3-203ENST00000400018 SLC2A9Q9NRM0 540 aa9.61□□□□□ -0.87
SKA3-203ENST00000400018 TEX13DA0A0J9YY54 714 aaPredicted RBP9.6□□□□□ -0.87
SKA3-203ENST00000400018 WNT2P09544 360 aa9.6□□□□□ -0.87
SKA3-203ENST00000400018 OR5AC1P0C628 307 aa9.6□□□□□ -0.87
SKA3-203ENST00000400018 LOXL3P58215 753 aa9.6□□□□□ -0.87
SKA3-203ENST00000400018 RPL30P62888 115 aaKnown RBP9.6□□□□□ -0.87
SKA3-203ENST00000400018 LRRC10Q5BKY1 277 aa9.6□□□□□ -0.87
SKA3-203ENST00000400018 CLDND2Q8NHS1 167 aa9.6□□□□□ -0.87
SKA3-203ENST00000400018 NAP1L6A6NFF2 107 aa9.6□□□□□ -0.87
SKA3-203ENST00000400018 GOSR2O14653 212 aa9.6□□□□□ -0.87
SKA3-203ENST00000400018 HEXAP06865 529 aa9.6□□□□□ -0.87
SKA3-203ENST00000400018 CD24P25063 80 aa9.6□□□□□ -0.87
SKA3-203ENST00000400018 SMCO1Q147U7 214 aa9.6□□□□□ -0.87
SKA3-203ENST00000400018 WDR25Q64LD2 544 aaPredicted RBP9.6□□□□□ -0.87
SKA3-203ENST00000400018 DHRS11Q6UWP2 260 aa9.6□□□□□ -0.87
SKA3-203ENST00000400018 TMUB2Q71RG4 321 aa9.6□□□□□ -0.87
SKA3-203ENST00000400018 H1FOOQ8IZA3 346 aaPredicted RBP9.6□□□□□ -0.87
SKA3-203ENST00000400018 THAP6Q8TBB0 222 aa9.6□□□□□ -0.87
SKA3-203ENST00000400018 C7orf50Q9BRJ6 194 aaKnown RBP9.6□□□□□ -0.87
SKA3-203ENST00000400018 SEBOXQ9HB31 216 aaPredicted RBP9.6□□□□□ -0.87
SKA3-203ENST00000400018 TNCP24821 2201 aa9.6□□□□□ -0.87
SKA3-203ENST00000400018 TRGV10A0A0A0MS01 117 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 IGHV3-72A0A0B4J1Y9 119 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 C13orf42A0A1B0GVH6 325 aa9.59□□□□□ -0.87
SKA3-203ENST00000400018 RAMP3O60896 148 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms