RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 NANOS1Q8WY41 292 aaKnown RBP12.19□□□□□ -0.46
CCDC144A-205ENST00000399264 COQ2Q96H96 371 aa12.19□□□□□ -0.46
CCDC144A-205ENST00000399264 WDR61Q9GZS3 305 aaKnown RBP12.19□□□□□ -0.46
CCDC144A-205ENST00000399264 HCFC1P51610 2035 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 HIST1H2BKO60814 126 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 PTBP3O95758 552 aaKnown RBP12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 HBZP02008 142 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 HIST1H2BJP06899 126 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 HIST1H2BOP23527 126 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 HIST1H2BBP33778 126 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 HIST1H2BDP58876 126 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 HIST1H2BCP62807 126 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 SLC38A11Q08AI6 406 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 HIST2H2BEQ16778 126 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 ACSM6Q6P461 480 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 HIST1H2BHQ93079 126 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 HIST1H2BNQ99877 126 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 HIST1H2BMQ99879 126 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 ZNF251Q9BRH9 671 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 UNKLQ9H9P5 680 aaKnown RBP12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 LIN7CQ9NUP9 197 aaKnown RBP12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 WIPI2Q9Y4P8 454 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 OR5H1A6NKK0 313 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 HBE1P02100 147 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 BMP5P22003 454 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 GABRA2P47869 451 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 TNFRSF9Q07011 255 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 FOXF2Q12947 444 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 CLEC12BQ2HXU8 276 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 TAF15Q92804 592 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 SLC25A22Q9H936 323 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 POLDIP2Q9Y2S7 368 aa12.18□□□□□ -0.46
CCDC144A-205ENST00000399264 TRAV20A0A0B4J274 112 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 ODAMA1E959 279 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 MAP1LC3B2A6NCE7 125 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 ZG16O60844 167 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 CCL11P51671 97 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 GABRA6Q16445 453 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 FER1L6-AS2Q96M78 137 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 MAP1LC3BQ9GZQ8 125 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 ZDHHC11Q9H8X9 412 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 TACC2O95359 2948 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 PCNX1Q96RV3 2341 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 TRAV1-1A0A0B4J248 108 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 LINC00473A8K010 186 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 IL2RGP31785 369 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 C1QL4Q86Z23 238 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 ABHD5Q8WTS1 349 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 TCTEX1D2Q8WW35 142 aa12.17□□□□□ -0.46
CCDC144A-205ENST00000399264 ST8SIA5O15466 376 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 TFF3Q07654 80 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 SLC35E3Q7Z769 313 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 OR13A1Q8NGR1 328 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 MBD3L1Q8WWY6 194 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 GALMQ96C23 342 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 GGACTQ9BVM4 153 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 TREM2Q9NZC2 230 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 A0A087WWC5 75 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 HOXA5P20719 270 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 HBG1P69891 147 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 HBG2P69892 147 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 PYY3Q5JQD4 70 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 PLA2G2CQ5R387 149 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 UTF1Q5T230 341 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 MOB1BQ7L9L4 216 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 FRZBQ92765 325 aa12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 CISD1Q9NZ45 108 aaKnown RBP12.16□□□□□ -0.46
CCDC144A-205ENST00000399264 ARFGEF3Q5TH69 2177 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 IQCF6A8MYZ5 107 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 GALR2O43603 387 aaPredicted RBP12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 SOD3P08294 240 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 RAC2P15153 192 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 WT1P19544 449 aaPredicted RBP12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 TNFSF10P50591 281 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 CD81P60033 236 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 WDR25Q64LD2 544 aaPredicted RBP12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 TMEM14EPQ6UXP3 125 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 ZNF610Q8N9Z0 462 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 NECAP1Q8NC96 275 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 LHX4Q969G2 390 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 GMPPAQ96IJ6 420 aaPredicted RBP12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 GPR61Q9BZJ8 451 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 ZNF737O75373 536 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 RBMXL2O75526 392 aaKnown RBP12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 EDDM3AQ14507 147 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 DPPA3Q6W0C5 159 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 Q8IYB0 196 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 ZNF645Q8N7E2 425 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 FDCSPQ8NFU4 85 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 RPUSD4Q96CM3 377 aaKnown RBP12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 FAM234AQ9H0X4 552 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 HIPK2Q9H2X6 1198 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 KCNIP1Q9NZI2 227 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 TNCP24821 2201 aa12.15□□□□□ -0.46
CCDC144A-205ENST00000399264 TMEM30CPA0ZSE6 113 aa12.15□□□□□ -0.47
CCDC144A-205ENST00000399264 MRPL49Q13405 166 aaKnown RBP12.15□□□□□ -0.47
CCDC144A-205ENST00000399264 SPRNQ5BIV9 151 aa12.15□□□□□ -0.47
CCDC144A-205ENST00000399264 TMEM41BQ5BJD5 291 aa12.15□□□□□ -0.47
CCDC144A-205ENST00000399264 WDR82Q6UXN9 313 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms