RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 OR10J1P30954 320 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 SLC25A47Q6Q0C1 308 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 FAM74A4Q5TZK3 123 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 MARS2Q96GW9 593 aaKnown RBP9.75□□□□□ -0.85
TTC28-201ENST00000397906 IGHV3-49A0A0A0MS15 119 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 CD81P60033 236 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 C19orf35Q6ZS72 473 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 V9GYH0 126 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 GCSHP23434 173 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 OR10G8Q8NGN5 311 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 MYOZ3Q8TDC0 251 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 NPBWR2P48146 333 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 DLL3Q9NYJ7 618 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 CXCL3P19876 107 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 BSXQ3C1V8 233 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 C7orf69Q9H7B7 122 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 IFNL4K9M1U5 179 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 IGF2P01344 180 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 WDR73Q6P4I2 378 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 TMEM91Q6ZNR0 172 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 WNT5BQ9H1J7 359 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 ZNF207O43670 478 aaKnown RBP9.74□□□□□ -0.85
TTC28-201ENST00000397906 RNF212Q495C1 297 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 KCNK7Q9Y2U2 307 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 PRSS23O95084 383 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 RNASE1P07998 156 aaKnown RBP9.74□□□□□ -0.85
TTC28-201ENST00000397906 RND2P52198 227 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 EMP1P54849 157 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 CRHP06850 196 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 BTF3P20290 206 aaKnown RBP9.74□□□□□ -0.85
TTC28-201ENST00000397906 TRBV5-3A0A0A0MS03 114 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 UQCC3Q6UW78 93 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 VPS25Q9BRG1 176 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 RBKSQ9H477 322 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 PDE6DO43924 150 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 PPOXP50336 477 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 RSG1Q9BU20 258 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 SEC11CQ9BY50 192 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 BRCA1P38398 1863 aaKnown RBP9.74□□□□□ -0.85
TTC28-201ENST00000397906 LINC00869P0C866 280 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 CCKARP32238 428 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 HERVK_113P61574 105 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 OR1N2Q8NGR9 330 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 NPVFQ9HCQ7 196 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 WDR90Q96KV7 1748 aa9.74□□□□□ -0.85
TTC28-201ENST00000397906 FAM53AQ6NSI3 398 aaPredicted RBP9.73□□□□□ -0.85
TTC28-201ENST00000397906 HOGA1Q86XE5 327 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 C11orf44Q8N8P7 122 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 KCNE5Q9UJ90 142 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 C5orf52A6NGY3 159 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 SPACA3Q8IXA5 215 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 SYT8Q8NBV8 401 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 ITLN2Q8WWU7 325 aaPredicted RBP9.73□□□□□ -0.85
TTC28-201ENST00000397906 ZFC3H1O60293 1989 aaKnown RBP9.73□□□□□ -0.85
TTC28-201ENST00000397906 DSPPQ9NZW4 1301 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 CTDSPLO15194 276 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 IER3P46695 156 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 DLK1P80370 383 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 RUNX1Q01196 453 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 FXYD3Q14802 87 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 CHCHD2Q9Y6H1 151 aaPredicted RBP9.73□□□□□ -0.85
TTC28-201ENST00000397906 MAP1BP46821 2468 aaKnown RBP9.73□□□□□ -0.85
TTC28-201ENST00000397906 PATJQ8NI35 1801 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 M0R3E3 92 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 MAS1LP35410 378 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 C19orf54Q5BKX5 351 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 UNQ9370/PRO34162Q6UXP9 181 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 CCDC88CQ9P219 2028 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 TMEM189A5PLL7 270 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 DLX1P56177 255 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 ISOC2Q96AB3 205 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 CBY3A6NI87 242 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 SRSF9Q13242 221 aaKnown RBP eCLIP9.73□□□□□ -0.85
TTC28-201ENST00000397906 MAP1LC3CQ9BXW4 147 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 H3BVH4 76 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 CRYBA2P53672 197 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 OR10D4PQ8NGN7 298 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 HIST3H3Q16695 136 aa9.73□□□□□ -0.85
TTC28-201ENST00000397906 GSX1Q9H4S2 264 aaPredicted RBP9.73□□□□□ -0.85
TTC28-201ENST00000397906 SIRT4Q9Y6E7 314 aaPredicted RBP9.73□□□□□ -0.85
TTC28-201ENST00000397906 MFAP4P55083 255 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 ST6GAL2Q96JF0 529 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 MMD2Q8IY49 270 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 FAM57AQ8TBR7 257 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 MIEN1Q9BRT3 115 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 ISG15P05161 165 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 CRISP2P16562 243 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 PACRGQ96M98 296 aaPredicted RBP9.72□□□□□ -0.85
TTC28-201ENST00000397906 TMEM262E9PQX1 116 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 FOXD3Q9UJU5 478 aaPredicted RBP9.72□□□□□ -0.85
TTC28-201ENST00000397906 PHLDA3Q9Y5J5 127 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 OR5AU1Q8NGC0 362 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 TBX15Q96SF7 602 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 MIXL1Q9H2W2 232 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 TMEM106BQ9NUM4 274 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 ZNF324O75467 553 aaPredicted RBP9.72□□□□□ -0.85
TTC28-201ENST00000397906 GPX1P07203 203 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 ARL6IP6Q8N6S5 226 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 RAMP1O60894 148 aa9.72□□□□□ -0.85
TTC28-201ENST00000397906 IGKV1D-33P01593 117 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms