RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 BCAT2O15382 392 aaPredicted RBP4.69□□□□□ -1.66
PTPRD-205ENST00000397611 SFTPCP11686 197 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 BRS3P32247 399 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 TSPAN7P41732 249 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 GPR12P47775 334 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 RND2P52198 227 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 PLP1P60201 277 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 CFHR1Q03591 330 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 RBPJQ06330 500 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 SHHQ15465 462 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 BTNL3Q6UXE8 466 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 SSX8Q7RTT4 187 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 HIST3H2BBQ8N257 126 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 TAAR6Q96RI8 345 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 KLHDC3Q9BQ90 382 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 RTP5Q14D33 572 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM252Q8N6L7 170 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 OR1F12Q8NHA8 337 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 CHRDL1Q9BU40 450 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 MRPL37Q9BZE1 423 aaKnown RBP4.69□□□□□ -1.66
PTPRD-205ENST00000397611 MRPL18Q9H0U6 180 aaKnown RBP4.69□□□□□ -1.66
PTPRD-205ENST00000397611 SH2D2AQ9NP31 389 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 CHCHD2Q9Y6H1 151 aaPredicted RBP4.69□□□□□ -1.66
PTPRD-205ENST00000397611 PTGDSP41222 190 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM97Q5BJF2 176 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 ZCCHC14Q8WYQ9 949 aaKnown RBP4.69□□□□□ -1.66
PTPRD-205ENST00000397611 MIEN1Q9BRT3 115 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 MPC1Q9Y5U8 109 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 MTCH2Q9Y6C9 303 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 MBD3L1Q8WWY6 194 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 PLPPR2Q96GM1 343 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 PYGO2Q9BRQ0 406 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 RTL8AQ9BWD3 113 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 ZNF319Q9P2F9 582 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 A0A096LPE4 126 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 hCG_38984A0A1B0GV85 526 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 A0A1W2PPZ6 126 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 OR4A8P0C604 315 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 HTR1DP28221 377 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 SPEM2Q0P670 501 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 Q1RN00 199 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 KRTAP27-1Q3LI81 207 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 OR4D5Q8NGN0 318 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 SMIM12Q96EX1 92 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 GMPPAQ96IJ6 420 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-205ENST00000397611 SSUH2Q9Y2M2 353 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 PLXND1Q9Y4D7 1925 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 C5orf49A4QMS7 147 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 DEFB108AA8MXU0 73 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 DLEU1O43261 78 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 PDE6DO43924 150 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 COX7A2P2O60397 106 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 SCRG1O75711 98 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 HAND1O96004 215 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 PPYP01298 95 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 LIFP15018 202 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 RIPPLY3P57055 190 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 TGIF2LYQ8IUE0 185 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 RAB37Q96AX2 223 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 C2orf88Q9BSF0 95 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 PKIBQ9C010 78 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 OR2D2Q9H210 308 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 C11orf1Q9H5F2 150 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 A0A1B0GU03 582 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 RPL36A-HNRNPH2H7BZ11 118 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 SRP19P09132 144 aaKnown RBP4.68□□□□□ -1.66
PTPRD-205ENST00000397611 CXCL1P09341 107 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 CEACAM6P40199 344 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 Q8IYB0 196 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 ZDHHC23Q8IYP9 409 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 BOD1Q96IK1 185 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 HIST1H2BLQ99880 126 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 LRFN3Q9BTN0 628 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 WNT10AQ9GZT5 417 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 RALYQ9UKM9 306 aaKnown RBP4.68□□□□□ -1.66
PTPRD-205ENST00000397611 CTXND1A0A1B0GTU2 59 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 ENSAO43768 121 aaKnown RBP4.68□□□□□ -1.66
PTPRD-205ENST00000397611 SCGB2A1O75556 95 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 RSPO1Q2MKA7 263 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-205ENST00000397611 NMSQ5H8A3 153 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 LYSMD4Q5XG99 296 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 OR4X1Q8NH49 305 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM38BQ9NVV0 291 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 TECRQ9NZ01 308 aaKnown RBP4.68□□□□□ -1.66
PTPRD-205ENST00000397611 WIPI2Q9Y4P8 454 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 K7EQM0 130 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 NDUFB4O95168 129 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 PSG2P11465 335 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 OR4C12Q96R67 309 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 MAP1LC3CQ9BXW4 147 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 AKIRIN1Q9H9L7 192 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-205ENST00000397611 A0A0A6YYD4 124 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 CA2P00918 260 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 SELENOVP59797 346 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 BPIFB3P59826 476 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 PIGYQ3MUY2 71 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 C19orf35Q6ZS72 473 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 PRSS3P2Q8NHM4 247 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 ST6GALNAC6Q969X2 333 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 TIMM8AO60220 97 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms