RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 DEFB112Q30KQ8 113 aa19.08■□□□□ 0.64
TSPAN4-203ENST00000397397 TGIF2LXQ8IUE1 241 aa19.08■□□□□ 0.64
TSPAN4-203ENST00000397397 RTN4IP1Q8WWV3 396 aaPredicted RBP19.08■□□□□ 0.64
TSPAN4-203ENST00000397397 ZNF251Q9BRH9 671 aa19.08■□□□□ 0.64
TSPAN4-203ENST00000397397 GAB2Q9UQC2 676 aa19.08■□□□□ 0.64
TSPAN4-203ENST00000397397 FN1P02751 2386 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-203ENST00000397397 OOSP1A8MZH6 123 aa19.07■□□□□ 0.64
TSPAN4-203ENST00000397397 UCP3P55916 312 aa19.07■□□□□ 0.64
TSPAN4-203ENST00000397397 ZNF816Q0VGE8 651 aaPredicted RBP19.07■□□□□ 0.64
TSPAN4-203ENST00000397397 SCGB2A2Q13296 93 aa19.07■□□□□ 0.64
TSPAN4-203ENST00000397397 PLA1AQ53H76 456 aa19.07■□□□□ 0.64
TSPAN4-203ENST00000397397 FAM71F2Q6NXP2 309 aa19.07■□□□□ 0.64
TSPAN4-203ENST00000397397 DRAM1Q8N682 238 aa19.07■□□□□ 0.64
TSPAN4-203ENST00000397397 OR13C8Q8NGS7 320 aa19.07■□□□□ 0.64
TSPAN4-203ENST00000397397 C5orf30Q96GV9 206 aa19.07■□□□□ 0.64
TSPAN4-203ENST00000397397 TBC1D24Q9ULP9 559 aa19.07■□□□□ 0.64
TSPAN4-203ENST00000397397 MDFIC2A0A1B0GVS7 189 aa19.06■□□□□ 0.64
TSPAN4-203ENST00000397397 M0R1X1 148 aa19.06■□□□□ 0.64
TSPAN4-203ENST00000397397 CCDC144NLQ6NUI1 221 aa19.06■□□□□ 0.64
TSPAN4-203ENST00000397397 LPCAT3Q6P1A2 487 aa19.06■□□□□ 0.64
TSPAN4-203ENST00000397397 MARCH1Q8TCQ1 289 aa19.06■□□□□ 0.64
TSPAN4-203ENST00000397397 MRGPRFQ96AM1 343 aa19.06■□□□□ 0.64
TSPAN4-203ENST00000397397 TXNL1O43396 289 aa19.05■□□□□ 0.64
TSPAN4-203ENST00000397397 PROP1O75360 226 aa19.05■□□□□ 0.64
TSPAN4-203ENST00000397397 IGLV2-14P01704 120 aa19.05■□□□□ 0.64
TSPAN4-203ENST00000397397 GNRHRP30968 328 aa19.05■□□□□ 0.64
TSPAN4-203ENST00000397397 ECI1P42126 302 aa19.05■□□□□ 0.64
TSPAN4-203ENST00000397397 CCR6P51684 374 aa19.05■□□□□ 0.64
TSPAN4-203ENST00000397397 BAMBIQ13145 260 aa19.05■□□□□ 0.64
TSPAN4-203ENST00000397397 ASAH1Q13510 395 aa19.05■□□□□ 0.64
TSPAN4-203ENST00000397397 ZNF818PQ6ZRF7 136 aa19.05■□□□□ 0.64
TSPAN4-203ENST00000397397 SLC38A6Q8IZM9 456 aa19.05■□□□□ 0.64
TSPAN4-203ENST00000397397 MRPL20Q9BYC9 149 aaKnown RBP19.05■□□□□ 0.64
TSPAN4-203ENST00000397397 MEGF9Q9H1U4 602 aa19.05■□□□□ 0.64
TSPAN4-203ENST00000397397 IGHV1-3A0A0C4DH29 117 aa19.04■□□□□ 0.64
TSPAN4-203ENST00000397397 BTCP35070 178 aa19.04■□□□□ 0.64
TSPAN4-203ENST00000397397 MSMO1Q15800 293 aa19.04■□□□□ 0.64
TSPAN4-203ENST00000397397 MZT2BQ6NZ67 158 aa19.04■□□□□ 0.64
TSPAN4-203ENST00000397397 MOB3BQ86TA1 216 aa19.04■□□□□ 0.64
TSPAN4-203ENST00000397397 OR8H3Q8N146 312 aa19.04■□□□□ 0.64
TSPAN4-203ENST00000397397 ZBTB34Q8NCN2 500 aa19.04■□□□□ 0.64
TSPAN4-203ENST00000397397 ZDHHC16Q969W1 377 aa19.04■□□□□ 0.64
TSPAN4-203ENST00000397397 AKR1E2Q96JD6 320 aa19.04■□□□□ 0.64
TSPAN4-203ENST00000397397 RSRP1Q9BUV0 290 aa19.04■□□□□ 0.64
TSPAN4-203ENST00000397397 NSD1Q96L73 2696 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-203ENST00000397397 A0A1W2PPI3 338 aa19.03■□□□□ 0.64
TSPAN4-203ENST00000397397 GPR31O00270 319 aa19.03■□□□□ 0.64
TSPAN4-203ENST00000397397 CRLF1O75462 422 aa19.03■□□□□ 0.64
TSPAN4-203ENST00000397397 ARHGDIBP52566 201 aa19.03■□□□□ 0.64
TSPAN4-203ENST00000397397 DEFA1P59665 94 aa19.03■□□□□ 0.64
TSPAN4-203ENST00000397397 DEFA3P59666 94 aa19.03■□□□□ 0.64
TSPAN4-203ENST00000397397 DRAXINQ8NBI3 349 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-203ENST00000397397 ZFAND1Q8TCF1 268 aa19.03■□□□□ 0.64
TSPAN4-203ENST00000397397 ZNF48Q96MX3 618 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-203ENST00000397397 NABP2Q9BQ15 211 aa19.03■□□□□ 0.64
TSPAN4-203ENST00000397397 NAV3Q8IVL0 2385 aa19.03■□□□□ 0.64
TSPAN4-203ENST00000397397 TIMM23O14925 209 aa19.02■□□□□ 0.64
TSPAN4-203ENST00000397397 TNFSF12O43508 249 aa19.02■□□□□ 0.64
TSPAN4-203ENST00000397397 CT45A6P0DMU7 189 aa19.02■□□□□ 0.64
TSPAN4-203ENST00000397397 CT45A5P0DMU8 189 aa19.02■□□□□ 0.64
TSPAN4-203ENST00000397397 CT45A7P0DMV0 189 aa19.02■□□□□ 0.64
TSPAN4-203ENST00000397397 PHLDA2Q53GA4 152 aa19.02■□□□□ 0.64
TSPAN4-203ENST00000397397 CMTM1Q8IZ96 169 aa19.02■□□□□ 0.64
TSPAN4-203ENST00000397397 SCGB3A2Q96PL1 93 aa19.02■□□□□ 0.64
TSPAN4-203ENST00000397397 NIPBLQ6KC79 2804 aaeCLIP19.02■□□□□ 0.63
TSPAN4-203ENST00000397397 PI3P19957 117 aa19.01■□□□□ 0.63
TSPAN4-203ENST00000397397 SURF2Q15527 256 aaPredicted RBP19.01■□□□□ 0.63
TSPAN4-203ENST00000397397 ABCA11PQ4W5N1 156 aa19.01■□□□□ 0.63
TSPAN4-203ENST00000397397 GLDNQ6ZMI3 551 aaPredicted RBP19.01■□□□□ 0.63
TSPAN4-203ENST00000397397 SIGLECL1Q8N7X8 197 aa19.01■□□□□ 0.63
TSPAN4-203ENST00000397397 POC5Q8NA72 575 aa19.01■□□□□ 0.63
TSPAN4-203ENST00000397397 BVESQ8NE79 360 aa19.01■□□□□ 0.63
TSPAN4-203ENST00000397397 GPHA2Q96T91 129 aa19.01■□□□□ 0.63
TSPAN4-203ENST00000397397 SLC25A21Q9BQT8 299 aaPredicted RBP19.01■□□□□ 0.63
TSPAN4-203ENST00000397397 C14orf166Q9Y224 244 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-203ENST00000397397 IGHV3-72A0A0B4J1Y9 119 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 BRS3P32247 399 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 DUTP33316 252 aaKnown RBP19■□□□□ 0.63
TSPAN4-203ENST00000397397 THBS3P49746 956 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 LINC00205P59089 165 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 DCTN2Q13561 401 aaKnown RBP19■□□□□ 0.63
TSPAN4-203ENST00000397397 RBMS2Q15434 407 aaKnown RBP19■□□□□ 0.63
TSPAN4-203ENST00000397397 LRRC75BQ2VPJ9 315 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 ZNF486Q96H40 463 aaPredicted RBP19■□□□□ 0.63
TSPAN4-203ENST00000397397 SSX3Q99909 188 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 OCEL1Q9H607 264 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 PALMDQ9NP74 551 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 GPR132Q9UNW8 380 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 VSIG4Q9Y279 399 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 CTSDP07339 412 aaPredicted RBP19■□□□□ 0.63
TSPAN4-203ENST00000397397 FAM157CP0CG43 387 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 S100GP29377 79 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 RAB13P51153 203 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 EIF4EBP1Q13541 118 aaPredicted RBP19■□□□□ 0.63
TSPAN4-203ENST00000397397 Q6YL49 198 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 ZNF66Q6ZN08 573 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 ZNF383Q8NA42 475 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 CFHR4Q92496 578 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 ADTRPQ96IZ2 230 aa19■□□□□ 0.63
TSPAN4-203ENST00000397397 HSD17B10Q99714 261 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms