RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 TRRAPQ9Y4A5 3859 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 WNK1Q9H4A3 2382 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 TRAV39A0A0B4J263 110 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 LY6LH3BQJ8 138 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 M0QZ24 198 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 KRTAP10-3P60369 221 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 LTC4SQ16873 150 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 ZFP69Q49AA0 526 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 VAX1Q5SQQ9 334 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 TRAT1Q6PIZ9 186 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 ARRDC1Q8N5I2 433 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 CAPSLQ8WWF8 208 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 ASB13Q8WXK3 278 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 RPEQ96AT9 228 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 AKR1E2Q96JD6 320 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 PECRQ9BY49 303 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 TRAPPC2LQ9UL33 140 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 PSG11Q9UQ72 335 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 KCNK7Q9Y2U2 307 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 ARPC1BO15143 372 aaKnown RBP11.69□□□□□ -0.54
SEC13-208ENST00000397109 CREBL2O60519 120 aaPredicted RBP11.69□□□□□ -0.54
SEC13-208ENST00000397109 ZNF735P0CB33 412 aa11.69□□□□□ -0.54
SEC13-208ENST00000397109 ARFRP1Q13795 201 aa11.69□□□□□ -0.54
SEC13-208ENST00000397109 TMEM30BQ3MIR4 351 aa11.69□□□□□ -0.54
SEC13-208ENST00000397109 C6orf183Q5T699 404 aa11.69□□□□□ -0.54
SEC13-208ENST00000397109 C6orf201Q7Z4U5 140 aa11.69□□□□□ -0.54
SEC13-208ENST00000397109 HOGA1Q86XE5 327 aa11.69□□□□□ -0.54
SEC13-208ENST00000397109 Q8N2B8 174 aa11.69□□□□□ -0.54
SEC13-208ENST00000397109 OR51S1Q8NGJ8 323 aa11.69□□□□□ -0.54
SEC13-208ENST00000397109 ARHGAP5-AS1Q96IT6 56 aa11.69□□□□□ -0.54
SEC13-208ENST00000397109 SCGB3A2Q96PL1 93 aa11.69□□□□□ -0.54
SEC13-208ENST00000397109 PLEKHJ1Q9NW61 149 aa11.69□□□□□ -0.54
SEC13-208ENST00000397109 C15orf65H3BRN8 121 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 SPINT2O43291 252 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 SSX5O60225 188 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 C1QBP02746 253 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 AMY2AP04746 511 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 IFNA6P05013 189 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 SULT1A3P0DMM9 295 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 SULT1A4P0DMN0 295 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 TAS2R46P59540 309 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 HERPUD1Q15011 391 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 Q3ZCU0 254 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 TREML4Q6UXN2 200 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 NOXA1Q86UR1 476 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 TMEM17Q86X19 198 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 OR10X1Q8NGY0 326 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 LEAP2Q969E1 77 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 TOMM40LQ969M1 308 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 SULT4A1Q9BR01 284 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 ZNF702PQ9H963 129 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 RANGRFQ9HD47 186 aaPredicted RBP11.68□□□□□ -0.54
SEC13-208ENST00000397109 SIGLEC9Q9Y336 463 aa11.68□□□□□ -0.54
SEC13-208ENST00000397109 UBE2QL1A1L167 161 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 MEIS3P1A6NDR6 274 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 SDCBPO00560 298 aaPredicted RBP11.67□□□□□ -0.54
SEC13-208ENST00000397109 FCER2P06734 321 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 ANXA3P12429 323 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 DTYMKP23919 212 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 ECI1P42126 302 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 GNG10P50151 68 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 RAB7AP51149 207 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 NKAPLQ5M9Q1 402 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 UTF1Q5T230 341 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 IDO2Q6ZQW0 420 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 THNSL2Q86YJ6 484 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 OR8H3Q8N146 312 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 LINC00311Q8N616 119 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 C8orf31Q8N9H6 132 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 OR4D10Q8NGI6 311 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 OR4K15Q8NH41 348 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 NUDCD2Q8WVJ2 157 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 GFOD1Q9NXC2 390 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 PKD1L1Q8TDX9 2849 aa11.67□□□□□ -0.54
SEC13-208ENST00000397109 SSNA1O43805 119 aa11.66□□□□□ -0.54
SEC13-208ENST00000397109 NAPSAO96009 420 aa11.66□□□□□ -0.54
SEC13-208ENST00000397109 IGHV3-7P01780 117 aa11.66□□□□□ -0.54
SEC13-208ENST00000397109 FAM106CPP0CH98 169 aa11.66□□□□□ -0.54
SEC13-208ENST00000397109 MRPS15P82914 257 aaKnown RBP11.66□□□□□ -0.54
SEC13-208ENST00000397109 CD83Q01151 205 aa11.66□□□□□ -0.54
SEC13-208ENST00000397109 CBX3Q13185 183 aa11.66□□□□□ -0.54
SEC13-208ENST00000397109 SRSF7Q16629 238 aaKnown RBP eCLIP11.66□□□□□ -0.54
SEC13-208ENST00000397109 ARSJQ5FYB0 599 aaPredicted RBP11.66□□□□□ -0.54
SEC13-208ENST00000397109 KLHDC1Q8N7A1 406 aa11.66□□□□□ -0.54
SEC13-208ENST00000397109 ZBTB8BQ8NAP8 495 aaPredicted RBP11.66□□□□□ -0.54
SEC13-208ENST00000397109 SNAPC3Q92966 411 aa11.66□□□□□ -0.54
SEC13-208ENST00000397109 CYYR1Q96J86 154 aa11.66□□□□□ -0.54
SEC13-208ENST00000397109 HYLS1Q96M11 299 aa11.66□□□□□ -0.54
SEC13-208ENST00000397109 FAAP24Q9BTP7 215 aa11.66□□□□□ -0.54
SEC13-208ENST00000397109 TINAGL1Q9GZM7 467 aaPredicted RBP11.66□□□□□ -0.54
SEC13-208ENST00000397109 RIMS4Q9H426 269 aaPredicted RBP11.66□□□□□ -0.54
SEC13-208ENST00000397109 KCNIP1Q9NZI2 227 aa11.66□□□□□ -0.54
SEC13-208ENST00000397109 ELF5Q9UKW6 265 aaPredicted RBP11.66□□□□□ -0.54
SEC13-208ENST00000397109 FLVCR2Q9UPI3 526 aa11.66□□□□□ -0.54
SEC13-208ENST00000397109 TRBV6-6A0A0A6YYG2 114 aa11.65□□□□□ -0.54
SEC13-208ENST00000397109 C12orf77C9JDV5 145 aa11.65□□□□□ -0.54
SEC13-208ENST00000397109 M0QZK8 103 aa11.65□□□□□ -0.54
SEC13-208ENST00000397109 OR2F2O95006 317 aa11.65□□□□□ -0.54
SEC13-208ENST00000397109 CD24P25063 80 aa11.65□□□□□ -0.54
SEC13-208ENST00000397109 IL3RAP26951 378 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms