RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 TMEM267Q0VDI3 215 aaPredicted RBP12.42□□□□□ -0.42
CBX3-202ENST00000396386 MORN2Q502X0 79 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 FAM209AQ5JX71 171 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 TMEM217Q8N7C4 229 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 GAFA1Q96PS6 74 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 AGMATQ9BSE5 352 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 FAM234AQ9H0X4 552 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 ZNF665Q9H7R5 613 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 CACFD1Q9UGQ2 172 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 ZFYVE26Q68DK2 2539 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 DSCAML1Q8TD84 2053 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 LAMA5O15230 3695 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 DSCAMO60469 2012 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 DFFBO76075 338 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 CLDN14O95500 239 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 PRH1P02810 166 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 MUC1P15941 1255 aaPredicted RBP12.42□□□□□ -0.42
CBX3-202ENST00000396386 ATP6V0CP27449 155 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 G6PCP35575 357 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 TAS2R30P59541 319 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 SRSF3P84103 164 aaKnown RBP12.42□□□□□ -0.42
CBX3-202ENST00000396386 DEFA5Q01523 94 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 ZNF616Q08AN1 781 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 TEX36Q5VZQ5 186 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 TMEM182Q6ZP80 229 aaPredicted RBP12.42□□□□□ -0.42
CBX3-202ENST00000396386 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.42□□□□□ -0.42
CBX3-202ENST00000396386 LYPD6BQ8NI32 183 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 LRRC46Q96FV0 321 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 WFIKKN1Q96NZ8 548 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 KCNJ16Q9NPI9 418 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 C19orf12Q9NSK7 152 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 PSENENQ9NZ42 101 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 COQ3Q9NZJ6 369 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 NKX6-3A6NJ46 265 aa12.41□□□□□ -0.42
CBX3-202ENST00000396386 LRRC30A6NM36 301 aa12.41□□□□□ -0.42
CBX3-202ENST00000396386 VSTM5A8MXK1 200 aa12.41□□□□□ -0.42
CBX3-202ENST00000396386 TRIM77I1YAP6 450 aa12.41□□□□□ -0.42
CBX3-202ENST00000396386 SIGLEC5O15389 551 aa12.41□□□□□ -0.42
CBX3-202ENST00000396386 ZNF788Q6ZQV5 615 aa12.41□□□□□ -0.42
CBX3-202ENST00000396386 COMMD1Q8N668 190 aa12.41□□□□□ -0.42
CBX3-202ENST00000396386 DEFB108BQ8NET1 73 aa12.41□□□□□ -0.42
CBX3-202ENST00000396386 GNPNAT1Q96EK6 184 aaPredicted RBP12.41□□□□□ -0.42
CBX3-202ENST00000396386 TSNAXQ99598 290 aaKnown RBP12.41□□□□□ -0.42
CBX3-202ENST00000396386 TMEM231Q9H6L2 316 aa12.41□□□□□ -0.42
CBX3-202ENST00000396386 PKD1L2Q7Z442 2459 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 DSPP15924 2871 aaKnown RBP12.4□□□□□ -0.42
CBX3-202ENST00000396386 TRGV10A0A0A0MS01 117 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 LINC00473A8K010 186 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 TSPAN15O95858 294 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 KRASP01116 189 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 GYPAP02724 150 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 LOXL3P58215 753 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 CCL8P80075 99 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 TLE1Q04724 770 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 MIDNQ504T8 468 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 OR2G3Q8NGZ4 309 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 CD300LFQ8TDQ1 290 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 EGLN1Q9GZT9 426 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 HSPB7Q9UBY9 170 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 FAM96BQ9Y3D0 163 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 BOD1L1Q8NFC6 3051 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 PTPRQQ9UMZ3 2332 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 UMAD1C9J7I0 102 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 ITGB1BP1O14713 200 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 RAB29O14966 203 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 AGPAT2O15120 278 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 CGB3P0DN86 165 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 CGB7P0DN87 165 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 ADCYAP1P18509 176 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 DUTP33316 252 aaKnown RBP12.4□□□□□ -0.42
CBX3-202ENST00000396386 BRWD1-AS2P59051 145 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 TNFRSF9Q07011 255 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 KLRB1Q12918 225 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 C17orf58Q2M2W7 97 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 DUX4L9Q6RFH8 374 aaPredicted RBP12.4□□□□□ -0.42
CBX3-202ENST00000396386 CCL13Q99616 98 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 IFI27L2Q9H2X8 130 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 UQCC1Q9NVA1 299 aa12.4□□□□□ -0.42
CBX3-202ENST00000396386 KBTBD11-OT1A0A1B0GTJ5 212 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 F8W036 122 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 ATXN7O15265 892 aaPredicted RBP12.39□□□□□ -0.43
CBX3-202ENST00000396386 CA7P43166 264 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 RAB7AP51149 207 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 UBE2KP61086 200 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 BTN1A1Q13410 526 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 NCMAPQ5T1S8 102 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 H2BFWTQ7Z2G1 175 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 FAM216BQ8N7L0 139 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 FAM213BQ8TBF2 198 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 PLPPR2Q96GM1 343 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 RBKSQ9H477 322 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 SAP30LQ9HAJ7 183 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.39□□□□□ -0.43
CBX3-202ENST00000396386 GFOD1Q9NXC2 390 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 DCAF16Q9NXF7 216 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 CLN8Q9UBY8 286 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 CARHSP1Q9Y2V2 147 aaKnown RBP12.39□□□□□ -0.43
CBX3-202ENST00000396386 CACNA1DQ01668 2161 aa12.39□□□□□ -0.43
CBX3-202ENST00000396386 RNASEK-C17orf49H0YIS7 233 aa12.38□□□□□ -0.43
CBX3-202ENST00000396386 M0R1X1 148 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms