RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 TMEM167BQ9NRX6 74 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 ZNF230Q9UIE0 474 aaPredicted RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 KIR2DL2P43627 348 aaPredicted RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 RHOBP62745 196 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 S100A12P80511 92 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 PJVKQ0ZLH3 352 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 LHFPL1Q86WI0 220 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 GAPTQ8N292 157 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM147Q9BVK8 224 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 PRSS50Q9UI38 385 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 RALYQ9UKM9 306 aaKnown RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 TRBV6-7A0A0A0MS04 114 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 IGHV2OR16-5A0A0B4J2B6 119 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 C3orf80F5H4A9 247 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 CLDN14O95500 239 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 CRYZL1O95825 349 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 HPXP02790 462 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 ZNF14P17017 642 aaPredicted RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 SAMD13Q5VXD3 122 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 CXorf67Q86X51 503 aaPredicted RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 CALHM1Q8IU99 346 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 BVESQ8NE79 360 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 OR10S1Q8NGN2 331 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 MS4A3Q96HJ5 214 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 SSX3Q99909 188 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 XKRY2A2RUG3 117 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 OR4A8P0C604 315 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 LMO1P25800 156 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 GNB2P62879 340 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 COMMD7Q86VX2 200 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 NUP37Q8NFH4 326 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 PSMG3Q9BT73 122 aaPredicted RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 STAB1Q9NY15 2570 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 M0R1X1 148 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 HSD17B6O14756 317 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 HTR1DP28221 377 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 EFNB2P52799 333 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 CEBPGP53567 150 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 RAB32Q13637 225 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 HLXQ14774 488 aaPredicted RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 C9orf62Q8N4C0 152 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 C15orf54Q8N8G6 183 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 CACNG8Q8WXS5 425 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 ZCCHC14Q8WYQ9 949 aaKnown RBP2.89□□□□□ -1.95
VPS13C-203ENST00000395896 SEC11CQ9BY50 192 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 OR51I2Q9H344 312 aa2.89□□□□□ -1.95
VPS13C-203ENST00000395896 ADAMTS20P59510 1910 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 IGKV1D-43A0A0B4J1Z2 117 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 CCL8P80075 99 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 RNFT1Q5M7Z0 435 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 FAM162BQ5T6X4 162 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 ST6GALNAC3Q8NDV1 305 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 FAM222BQ8WU58 562 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 FLVCR2Q9UPI3 526 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 CT45A10P0DMU9 189 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 ATF4P18848 351 aaPredicted RBP2.88□□□□□ -1.95
VPS13C-203ENST00000395896 IGHV1-2P23083 117 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 RPL8P62917 257 aaKnown RBP2.88□□□□□ -1.95
VPS13C-203ENST00000395896 HPSE2Q8WWQ2 592 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 P2RX4Q99571 388 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 RCC2Q9P258 522 aaKnown RBP2.88□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM56-RWDD3S4R434 201 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 ZFP92A6NM28 416 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 CSN1S1P47710 185 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 KHDC3LQ587J8 217 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 FAM71F2Q6NXP2 309 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 DEFB108BQ8NET1 73 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 DAZAP1Q96EP5 407 aaKnown RBP2.88□□□□□ -1.95
VPS13C-203ENST00000395896 TMEM218A2RU14 115 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 LINC00862A6NCI5 91 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 OOSP1A8MZH6 123 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 NPY1RP25929 384 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 C20orf204Q6ZNR8 217 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 THNSL2Q86YJ6 484 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 EIF4E3Q8N5X7 224 aaKnown RBP2.88□□□□□ -1.95
VPS13C-203ENST00000395896 HES4Q9HCC6 221 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 LOC400499M0QZD8 3231 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 IGKV1-9A0A0C4DH69 117 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 ERVH48-1M5A8F1 160 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 IGLV3-1P01715 115 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 SNRNP70P08621 437 aaKnown RBP2.88□□□□□ -1.95
VPS13C-203ENST00000395896 UBE2KP61086 200 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 RPS16P62249 146 aaKnown RBP2.88□□□□□ -1.95
VPS13C-203ENST00000395896 ACP7Q6ZNF0 438 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 Q6ZSR3 168 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 SLC7A5P1Q8MH63 180 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 RSRP1Q9BUV0 290 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 KLK13Q9UKR3 277 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 PPIHO43447 177 aaKnown RBP2.88□□□□□ -1.95
VPS13C-203ENST00000395896 HBZP02008 142 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 C19orf57Q0VDD7 668 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 MOGAT3Q86VF5 341 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 OR52E5Q8NH55 327 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 MRGPRDQ8TDS7 321 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 SLC35D1Q9NTN3 355 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 ITPR1Q14643 2758 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 ELOA3CA0A087WX78 387 aaPredicted RBP2.88□□□□□ -1.95
VPS13C-203ENST00000395896 CXorf65A6NEN9 183 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 M0QZK8 103 aa2.88□□□□□ -1.95
VPS13C-203ENST00000395896 RCC1P18754 421 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms