RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 VCX3BQ9H321 246 aa4.81□□□□□ -1.64
PTPN20-208ENST00000395727 BANF2Q9H503 90 aa4.81□□□□□ -1.64
PTPN20-208ENST00000395727 KCNIP1Q9NZI2 227 aa4.81□□□□□ -1.64
PTPN20-208ENST00000395727 HSF4Q9ULV5 492 aa4.81□□□□□ -1.64
PTPN20-208ENST00000395727 MGAT4AQ9UM21 535 aa4.81□□□□□ -1.64
PTPN20-208ENST00000395727 A0A087WWL8 130 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 IGHV3-43A0A0B4J1X8 118 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 A0A1W2PPE3 182 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 A0A1W2PPK0 400 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 OR5H14A6NHG9 310 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 SLC31A2O15432 143 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 RGS10O43665 173 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 MRPS14O60783 128 aaKnown RBP4.8□□□□□ -1.64
PTPN20-208ENST00000395727 NDUFA3O95167 84 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 HLA-DRB1P01911 266 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 IGHV3-43DP0DP04 118 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 GALP22466 123 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 CRHBPP24387 322 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 PSMB8P28062 276 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 SOX6P35712 828 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 MYCNOSP40205 109 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 CDX1P47902 265 aaPredicted RBP4.8□□□□□ -1.64
PTPN20-208ENST00000395727 REG1BP48304 166 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 PSMD7P51665 324 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 CRIP2P52943 208 aaPredicted RBP4.8□□□□□ -1.64
PTPN20-208ENST00000395727 INSL4Q14641 139 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 MED22Q15528 200 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 PNLIPRP3Q17RR3 467 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 C9orf152Q5JTZ5 239 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 FAM27D1Q5T7N8 215 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 CD200R1LQ6Q8B3 271 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 C10orf99Q6UWK7 81 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 TMEM91Q6ZNR0 172 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 Q6ZNX1 250 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 MOB3BQ86TA1 216 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 NPBQ8NG41 125 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 OR1L1Q8NH94 360 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 PTX4Q96A99 478 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 GALMQ96C23 342 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 NABP2Q9BQ15 211 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 AIFM2Q9BRQ8 373 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 URM1Q9BTM9 101 aaKnown RBP4.8□□□□□ -1.64
PTPN20-208ENST00000395727 TMED9Q9BVK6 235 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 TOLLIPQ9H0E2 274 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 LPAR5Q9H1C0 372 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 IFI27L2Q9H2X8 130 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 ACOT13Q9NPJ3 140 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 OR2S2Q9NQN1 319 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 PIPOXQ9P0Z9 390 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 ABRACLQ9P1F3 81 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 NKX1-2Q9UD57 310 aaPredicted RBP4.8□□□□□ -1.64
PTPN20-208ENST00000395727 ZMAT5Q9UDW3 170 aaKnown RBP4.8□□□□□ -1.64
PTPN20-208ENST00000395727 BLOC1S6Q9UL45 172 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 DMRT1Q9Y5R6 373 aa4.8□□□□□ -1.64
PTPN20-208ENST00000395727 KIAA2026Q5HYC2 2103 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 TGP01266 2768 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 SAA2-SAA4A0A096LPE2 208 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 A0A0A6YYD4 124 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 TRAV1-2A0A0B4J238 106 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 SH2D7A6NKC9 451 aaPredicted RBP4.79□□□□□ -1.64
PTPN20-208ENST00000395727 NCBP2LA6PVI3 153 aaKnown RBP4.79□□□□□ -1.64
PTPN20-208ENST00000395727 ZNF736B4DX44 427 aaPredicted RBP4.79□□□□□ -1.64
PTPN20-208ENST00000395727 PTGES3LE9PB15 166 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 RAB29O14966 203 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 LDLRAD4O15165 306 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 RBBP9O75884 186 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 SAA2P0DJI9 122 aaPredicted RBP4.79□□□□□ -1.64
PTPN20-208ENST00000395727 IGLL1P15814 213 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 ARSBP15848 533 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 BLVRBP30043 206 aaPredicted RBP4.79□□□□□ -1.64
PTPN20-208ENST00000395727 PPIFP30405 207 aaKnown RBP4.79□□□□□ -1.64
PTPN20-208ENST00000395727 RUNX1Q01196 453 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 DCTN2Q13561 401 aaKnown RBP4.79□□□□□ -1.64
PTPN20-208ENST00000395727 FHL3Q13643 280 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 HNF4GQ14541 408 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 GNMTQ14749 295 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 KIR2DS1Q14954 304 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 P2RY14Q15391 338 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 CXorf66Q5JRM2 361 aaPredicted RBP4.79□□□□□ -1.64
PTPN20-208ENST00000395727 LIPKQ5VXJ0 399 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 C6orf201Q7Z4U5 140 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 CEACAM19Q7Z692 300 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 ZNF329Q86UD4 541 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 ZNF695Q8IW36 515 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 TCTEX1D1Q8N7M0 179 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 OR2AK2Q8NG84 335 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 OR8U1Q8NH10 309 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 UBALD1Q8TB05 177 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 MRAPQ8TCY5 172 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 C4orf3Q8WVX3 66 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 SGCDQ92629 289 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 FAM46BQ96A09 425 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 NOL4LQ96MY1 436 aaPredicted RBP4.79□□□□□ -1.64
PTPN20-208ENST00000395727 GFI1Q99684 422 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 MGLLQ99685 303 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 RNF5Q99942 180 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 RASL11BQ9BPW5 248 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 ZNF251Q9BRH9 671 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 AGMATQ9BSE5 352 aa4.79□□□□□ -1.64
PTPN20-208ENST00000395727 CENPOQ9BU64 300 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms