RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TSPOP30536 169 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 CARD18P57730 90 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 UNQ5815/PRO19632Q6UWF5 114 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 ZNF818PQ6ZRF7 136 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 SGMS2Q8NHU3 365 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 SLC7A10Q9NS82 523 aa16.01■□□□□ 0.15
HOXC6-202ENST00000394331 PDE6DO43924 150 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 IGKV1D-33P01593 117 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 IGKV1-33P01594 117 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 SSR4P51571 173 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 TESK1Q15569 626 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 DMRTC1Q5HYR2 192 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 PHYHD1Q5SRE7 291 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 Q6ZPA2 131 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 PILRBQ9UKJ0 227 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 H3BP45 60 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 NDUFS8O00217 210 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 PDCD6O75340 191 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 CCL3P10147 92 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 ARL16Q0P5N6 197 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 FFAR4Q5NUL3 377 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 HAPLN4Q86UW8 402 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 NABP1Q96AH0 204 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 RBM24Q9BX46 236 aaKnown RBP16■□□□□ 0.15
HOXC6-202ENST00000394331 FSCN3Q9NQT6 498 aa16■□□□□ 0.15
HOXC6-202ENST00000394331 C5orf63A6NC05 138 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 ZNF253O75346 499 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 COX6A1P12074 109 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 OTX1P32242 354 aaPredicted RBP15.99■□□□□ 0.15
HOXC6-202ENST00000394331 SPIN3Q5JUX0 258 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 PMS2CLQ68D20 193 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 GAPTQ8N292 157 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 PSMF1Q92530 271 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 DYRK2Q92630 601 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 CST9LQ9H4G1 147 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 TRBV9A0A0B4J1U6 114 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 ZIC3O60481 467 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 TCF23Q7RTU1 214 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 SPTSSAQ969W0 71 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 SMIM12Q96EX1 92 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 SFRP2Q96HF1 295 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 STRADBQ9C0K7 418 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 TUBG2Q9NRH3 451 aa15.99■□□□□ 0.15
HOXC6-202ENST00000394331 M0R135 149 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 BAGE3Q86Y29 109 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 BAGE2Q86Y30 109 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 ZNF799Q96GE5 643 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 SYNGR2O43760 224 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 MCEMP1Q8IX19 187 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 NUDT11Q96G61 164 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 UCN2Q96RP3 112 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 ULBP2Q9BZM5 246 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 MRPL18Q9H0U6 180 aaKnown RBP15.98■□□□□ 0.15
HOXC6-202ENST00000394331 PROK2Q9HC23 129 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 PLEK2Q9NYT0 353 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 PLA2G3Q9NZ20 509 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 PSENENQ9NZ42 101 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 IGHV3-15A0A0B4J1V0 119 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 GJE1A6NN92 205 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 TUSC2O75896 110 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 NXPH3O95157 252 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 NPPCP23582 126 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 MALLQ13021 153 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 OSR2Q8N2R0 312 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 OR4C12Q96R67 309 aa15.98■□□□□ 0.15
HOXC6-202ENST00000394331 SHANK1Q9Y566 2161 aa15.97■□□□□ 0.15
HOXC6-202ENST00000394331 OR5B21A6NL26 309 aa15.97■□□□□ 0.15
HOXC6-202ENST00000394331 KRTDAPP60985 99 aa15.97■□□□□ 0.15
HOXC6-202ENST00000394331 RSPO1Q2MKA7 263 aaPredicted RBP15.97■□□□□ 0.15
HOXC6-202ENST00000394331 RPS19BP1Q86WX3 136 aaKnown RBP15.97■□□□□ 0.15
HOXC6-202ENST00000394331 ZIC4Q8N9L1 334 aa15.97■□□□□ 0.15
HOXC6-202ENST00000394331 OR2M7Q8NG81 312 aa15.97■□□□□ 0.15
HOXC6-202ENST00000394331 SH2D2AQ9NP31 389 aa15.97■□□□□ 0.15
HOXC6-202ENST00000394331 IGLC7A0M8Q6 106 aa15.97■□□□□ 0.15
HOXC6-202ENST00000394331 M0QZ24 198 aa15.97■□□□□ 0.15
HOXC6-202ENST00000394331 GALR2O43603 387 aaPredicted RBP15.97■□□□□ 0.15
HOXC6-202ENST00000394331 GDF9O60383 454 aa15.97■□□□□ 0.15
HOXC6-202ENST00000394331 KLF7O75840 302 aaPredicted RBP15.97■□□□□ 0.15
HOXC6-202ENST00000394331 CNN3Q15417 329 aaKnown RBP15.97■□□□□ 0.15
HOXC6-202ENST00000394331 TMEM249Q2WGJ8 235 aa15.97■□□□□ 0.15
HOXC6-202ENST00000394331 ZNF468Q5VIY5 522 aaPredicted RBP15.97■□□□□ 0.15
HOXC6-202ENST00000394331 FAM27BQ5VT28 67 aa15.97■□□□□ 0.15
HOXC6-202ENST00000394331 LSM10Q969L4 123 aaKnown RBP15.97■□□□□ 0.15
HOXC6-202ENST00000394331 RNF114Q9Y508 228 aa15.97■□□□□ 0.15
HOXC6-202ENST00000394331 DEGS1O15121 323 aa15.96■□□□□ 0.15
HOXC6-202ENST00000394331 SERPINA7P05543 415 aa15.96■□□□□ 0.15
HOXC6-202ENST00000394331 SF3B5Q9BWJ5 86 aaKnown RBP15.96■□□□□ 0.15
HOXC6-202ENST00000394331 C11orf94C9JXX5 98 aa15.96■□□□□ 0.15
HOXC6-202ENST00000394331 DNPH1O43598 174 aa15.96■□□□□ 0.15
HOXC6-202ENST00000394331 ANGPTL7O43827 346 aa15.96■□□□□ 0.15
HOXC6-202ENST00000394331 LHFPL2Q6ZUX7 228 aa15.96■□□□□ 0.15
HOXC6-202ENST00000394331 OR2Y1Q8NGV0 311 aa15.96■□□□□ 0.15
HOXC6-202ENST00000394331 LOXL4Q96JB6 756 aa15.96■□□□□ 0.15
HOXC6-202ENST00000394331 A0A0G2JRQ6 117 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 MDFIC2A0A1B0GVS7 189 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 SLC22A20A6NK97 555 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 TNFSF12O43508 249 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 PAGE4O60829 102 aa15.95■□□□□ 0.14
HOXC6-202ENST00000394331 RPS18P62269 152 aaKnown RBP15.95■□□□□ 0.14
HOXC6-202ENST00000394331 OR10J3Q5JRS4 329 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms