RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 SLC25A31Q9H0C2 315 aa9.3□□□□□ -0.92
TCOF1-203ENST00000394269 GCM1Q9NP62 436 aa9.3□□□□□ -0.92
TCOF1-203ENST00000394269 SRRM5B3KS81 715 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 FGF16O43320 207 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 S1PR2O95136 353 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 LMO1P25800 156 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 GPR12P47775 334 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 GNG10P50151 68 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 NKX6-1P78426 367 aaPredicted RBP9.29□□□□□ -0.92
TCOF1-203ENST00000394269 ID3Q02535 119 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 GUCA2BQ16661 112 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 STX12Q86Y82 276 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 PPP1R35Q8TAP8 253 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 RND1Q92730 232 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 FCGR3BO75015 233 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 MUC1P15941 1255 aaPredicted RBP9.29□□□□□ -0.92
TCOF1-203ENST00000394269 TNFSF4P23510 183 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 TDGF1P3P51864 188 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 RPL23AP62750 156 aaKnown RBP9.29□□□□□ -0.92
TCOF1-203ENST00000394269 MST1LQ2TV78 715 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 RPL39P5Q59GN2 51 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 UBAC2Q8NBM4 344 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 LINC01560Q8TB33 94 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 WFIKKN1Q96NZ8 548 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 PSENENQ9NZ42 101 aa9.29□□□□□ -0.92
TCOF1-203ENST00000394269 TMEM218A2RU14 115 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 CLDN14O95500 239 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 ATP6V0CP27449 155 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 RPS23P62266 143 aaKnown RBP9.28□□□□□ -0.92
TCOF1-203ENST00000394269 PJVKQ0ZLH3 352 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 THNSL2Q86YJ6 484 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 ZNF645Q8N7E2 425 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 ZCCHC14Q8WYQ9 949 aaKnown RBP9.28□□□□□ -0.92
TCOF1-203ENST00000394269 AKR1E2Q96JD6 320 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 TLNRD1Q9H1K6 362 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 LYRM2Q9NU23 88 aaPredicted RBP9.28□□□□□ -0.92
TCOF1-203ENST00000394269 RNF7Q9UBF6 113 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 IGSF10Q6WRI0 2623 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 ARFGEF3Q5TH69 2177 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 M0R1X1 148 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 SYNGR2O43760 224 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 TUBG1P23258 451 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 SULT1A2P50226 295 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 FAM90A1Q86YD7 464 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 KCNJ16Q9NPI9 418 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 TUBG2Q9NRH3 451 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 LINC00473A8K010 186 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 ZNF737O75373 536 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 AKR1C3P42330 323 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 RBPJQ06330 500 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 MRGPRGQ86SM5 289 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 LILRB2Q8N423 598 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 C5orf30Q96GV9 206 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 MMP26Q9NRE1 261 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 CLN8Q9UBY8 286 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 WNK2Q9Y3S1 2297 aa9.28□□□□□ -0.92
TCOF1-203ENST00000394269 A0A1B0GU03 582 aa9.27□□□□□ -0.92
TCOF1-203ENST00000394269 PRSS47A8MTI9 375 aa9.27□□□□□ -0.92
TCOF1-203ENST00000394269 IFNL4K9M1U5 179 aa9.27□□□□□ -0.92
TCOF1-203ENST00000394269 GAPDHP04406 335 aaKnown RBP9.27□□□□□ -0.92
TCOF1-203ENST00000394269 CATR1Q13166 79 aa9.27□□□□□ -0.92
TCOF1-203ENST00000394269 JMJD1CQ15652 2540 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 KIAA1324LA8MWY0 1029 aaPredicted RBP9.27□□□□□ -0.93
TCOF1-203ENST00000394269 RNASEK-C17orf49H0YIS7 233 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 MGST3O14880 152 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 CD200P41217 278 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 OR2B8PP59922 312 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 TLE1Q04724 770 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 ZNF266Q14584 549 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 NCR3LG1Q68D85 454 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 H2BFWTQ7Z2G1 175 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 DYNLRB1Q9NP97 96 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 UQCC1Q9NVA1 299 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 ZNRD1Q9P1U0 126 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 CFAP46Q8IYW2 2715 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 RNF212BA8MTL3 300 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 GZMHP20718 246 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 PTAFRP25105 342 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 F2RL1P55085 397 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 PAX9P55771 341 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 H1FXQ92522 213 aaKnown RBP9.27□□□□□ -0.93
TCOF1-203ENST00000394269 SNX22Q96L94 193 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 RSG1Q9BU20 258 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 MSRB2Q9Y3D2 182 aa9.27□□□□□ -0.93
TCOF1-203ENST00000394269 SONP18583 2426 aaKnown RBP9.26□□□□□ -0.93
TCOF1-203ENST00000394269 FAM74A7A6NL05 159 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 CEBPZOSA8MTT3 80 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 IFNA17P01571 189 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 CD55P08174 381 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 PLA2G5P39877 138 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 ZNF134P52741 427 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 ZNF273Q14593 569 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 ADIPOQQ15848 244 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 FAM74A3Q4VXF1 159 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 FAM169BQ8N8A8 192 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 SFT2D1Q8WV19 159 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 ZDHHC16Q969W1 377 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 SMIM8Q96KF7 97 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 C20orf24Q9BUV8 137 aa9.26□□□□□ -0.93
TCOF1-203ENST00000394269 HINT2Q9BX68 163 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms