RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 RAMP3O60896 148 aa7.11□□□□□ -1.27
TDP1-203ENST00000393454 FSTL3O95633 263 aa7.11□□□□□ -1.27
TDP1-203ENST00000393454 F12P00748 615 aaPredicted RBP7.11□□□□□ -1.27
TDP1-203ENST00000393454 MBPP02686 304 aaPredicted RBP7.11□□□□□ -1.27
TDP1-203ENST00000393454 GPR6P46095 362 aaPredicted RBP7.11□□□□□ -1.27
TDP1-203ENST00000393454 EFNA4P52798 201 aa7.11□□□□□ -1.27
TDP1-203ENST00000393454 TMEM33P57088 247 aa7.11□□□□□ -1.27
TDP1-203ENST00000393454 EIF4EBP1Q13541 118 aaPredicted RBP7.11□□□□□ -1.27
TDP1-203ENST00000393454 ZNF585BQ52M93 769 aa7.11□□□□□ -1.27
TDP1-203ENST00000393454 HEPN1Q6WQI6 88 aa7.11□□□□□ -1.27
TDP1-203ENST00000393454 OR10A7Q8NGE5 316 aa7.11□□□□□ -1.27
TDP1-203ENST00000393454 FAM216AQ8WUB2 273 aa7.11□□□□□ -1.27
TDP1-203ENST00000393454 RAB39BQ96DA2 213 aa7.11□□□□□ -1.27
TDP1-203ENST00000393454 NEIL1Q96FI4 390 aaPredicted RBP7.11□□□□□ -1.27
TDP1-203ENST00000393454 SPOCK3Q9BQ16 436 aa7.11□□□□□ -1.27
TDP1-203ENST00000393454 AKAP6Q13023 2319 aa7.11□□□□□ -1.27
TDP1-203ENST00000393454 TRBV23-1A0A0A0MS06 115 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 KANTRA0A1W2PQU2 76 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 K7EPK0 472 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 ITGB1BP1O14713 200 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 RGS13O14921 159 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 ST8SIA3O43173 380 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 OR2F2O95006 317 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 NXPH3O95157 252 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 GOSR1O95249 250 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 IGKV1-39P01597 117 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 IGKV1D-39P04432 117 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 DUTP33316 252 aaKnown RBP7.1□□□□□ -1.27
TDP1-203ENST00000393454 TLE4Q04727 773 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 OR2F1Q13607 317 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 TMEM155Q4W5P6 130 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 NMSQ5H8A3 153 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 ZNF841Q6ZN19 808 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 FAM71E2Q8N5Q1 922 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 GPR146Q96CH1 333 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 ZFP57Q9NU63 452 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 SAA2-SAA4A0A096LPE2 208 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 A0A0G2JRQ6 117 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 A1L4Q6 167 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 RNF222A6NCQ9 220 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 RAB29O14966 203 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 GPR37O15354 613 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 FCGR3BO75015 233 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 DEDDO75618 318 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 KRASP01116 189 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 SAA2P0DJI9 122 aaPredicted RBP7.1□□□□□ -1.27
TDP1-203ENST00000393454 NKX2-1P43699 371 aaPredicted RBP7.1□□□□□ -1.27
TDP1-203ENST00000393454 IZUMO4Q1ZYL8 232 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 ESCO2Q56NI9 601 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 WDR25Q64LD2 544 aaPredicted RBP7.1□□□□□ -1.27
TDP1-203ENST00000393454 NCR3LG1Q68D85 454 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 KCNRGQ8N5I3 272 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 ZNF439Q8NDP4 499 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 OR4D5Q8NGN0 318 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 MAGT1Q9H0U3 335 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 HEXA-AS1Q9H8Q6 139 aa7.1□□□□□ -1.27
TDP1-203ENST00000393454 RCL1Q9Y2P8 373 aaKnown RBP7.1□□□□□ -1.27
TDP1-203ENST00000393454 UTP20O75691 2785 aaKnown RBP7.09□□□□□ -1.27
TDP1-203ENST00000393454 PPIAL4CA0A0B4J2A2 164 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 A0A1W2PPH5 198 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 PROP1O75360 226 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 ATG12O94817 140 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 S1PR2O95136 353 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 IGKV1-5P01602 117 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 PPIAL4GP0DN37 164 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 LYL1P12980 280 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 G6PCP35575 357 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 GNB2P62879 340 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 ZNF345Q14585 488 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 CXorf66Q5JRM2 361 aaPredicted RBP7.09□□□□□ -1.27
TDP1-203ENST00000393454 TEX261Q6UWH6 196 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 SLC25A48Q6ZT89 311 aaKnown RBP7.09□□□□□ -1.27
TDP1-203ENST00000393454 TCTEX1D1Q8N7M0 179 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.09□□□□□ -1.27
TDP1-203ENST00000393454 CD300LFQ8TDQ1 290 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 LSM10Q969L4 123 aaKnown RBP7.09□□□□□ -1.27
TDP1-203ENST00000393454 S1PR3Q99500 378 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 CCL19Q99731 98 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 ZNRD1Q9P1U0 126 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 CACNG5Q9UF02 275 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 PRELID3BQ9Y3B1 194 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 POMT1Q9Y6A1 747 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 U3KQ87 197 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 MALRD1Q5VYJ5 2156 aa7.09□□□□□ -1.27
TDP1-203ENST00000393454 UBR5O95071 2799 aaPredicted RBP7.09□□□□□ -1.28
TDP1-203ENST00000393454 A0A1B0GU03 582 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 MSGN1A6NI15 193 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 E5RGE8 158 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 WRBO00258 174 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 BCL2L11O43521 198 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 SSSCA1O60232 199 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 IFNA7P01567 189 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 COX6B1P14854 86 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 DLX6P56179 175 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 BRWD1-AS2P59051 145 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 POLR2GP62487 172 aaKnown RBP eCLIP7.08□□□□□ -1.28
TDP1-203ENST00000393454 VAMP2P63027 116 aa7.08□□□□□ -1.28
TDP1-203ENST00000393454 SRSF1Q07955 248 aaKnown RBP eCLIP7.08□□□□□ -1.28
TDP1-203ENST00000393454 C1orf229Q6ZS94 237 aaPredicted RBP7.08□□□□□ -1.28
TDP1-203ENST00000393454 ZNF767PQ75MW2 155 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms