RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TNFRSF18Q9Y5U5 241 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 A0A1B0GTH9 108 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 EDIL3O43854 480 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 POLR2GP62487 172 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCDC50-201ENST00000392455 CX3CL1P78423 397 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 SRSF6Q13247 344 aaKnown RBP12.89□□□□□ -0.35
CCDC50-201ENST00000392455 MMDQ15546 238 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 C1orf185Q5T7R7 199 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 DDA1Q9BW61 102 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 MVDP53602 400 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 ZFP64Q9NPA5 681 aa12.89□□□□□ -0.35
CCDC50-201ENST00000392455 ECSCRQ19T08 205 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 ANAPC13Q9BS18 74 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 MALP21145 153 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 SPEM2Q0P670 501 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 PDCD1Q15116 288 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 WDR38Q5JTN6 314 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 MMD2Q8IY49 270 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 LINC01465Q8N7H1 131 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 LINC00470Q9BZP3 86 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 GGTLC3B5MD39 225 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 LGALS1P09382 135 aaKnown RBP12.88□□□□□ -0.35
CCDC50-201ENST00000392455 ZNF880Q6PDB4 577 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 Q6ZS52 159 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 PLSCR2Q9NRY7 297 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 ELF5Q9UKW6 265 aaPredicted RBP12.88□□□□□ -0.35
CCDC50-201ENST00000392455 DOCK3Q8IZD9 2030 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 A0A1B0GWB2 263 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 TTC9CQ8N5M4 171 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 CADM4Q8NFZ8 388 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 NHSQ6T4R5 1651 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 B4GALNT1Q00973 533 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 SLC23A3Q6PIS1 610 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 SIGLEC7Q9Y286 467 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 ADAMTSL3P82987 1691 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 IGLV3-25P01717 112 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 C12orf73Q69YU5 71 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 FAM109BQ6ICB4 259 aaPredicted RBP12.88□□□□□ -0.35
CCDC50-201ENST00000392455 OR8B12Q8NGG6 310 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 SFXN3Q9BWM7 321 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 C3orf80F5H4A9 247 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 DMRT1Q9Y5R6 373 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 SPCS1Q9Y6A9 102 aa12.88□□□□□ -0.35
CCDC50-201ENST00000392455 PRSS53Q2L4Q9 553 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 TRAV9-1A0A075B6T8 112 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 H0Y980 276 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 KLK8O60259 260 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 ZFPL1O95159 310 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 ZNF32P17041 273 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 SCN7AQ01118 1682 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 DLL1O00548 723 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 HSF4Q9ULV5 492 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 TRPM3Q9HCF6 1732 aaPredicted RBP12.87□□□□□ -0.35
CCDC50-201ENST00000392455 PAX1P15863 534 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 ZNF418Q8TF45 676 aaPredicted RBP12.87□□□□□ -0.35
CCDC50-201ENST00000392455 TNFRSF12AQ9NP84 129 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 ZNF137PP52743 207 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 FAM27D1Q5T7N8 215 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 SLC25A10Q9UBX3 287 aaPredicted RBP12.87□□□□□ -0.35
CCDC50-201ENST00000392455 ARAP2Q8WZ64 1704 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 METTL12A8MUP2 240 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 GPX1P07203 203 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 ZNF658BQ4V348 819 aaPredicted RBP12.87□□□□□ -0.35
CCDC50-201ENST00000392455 TMEM177Q53S58 311 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 CNRIP1Q96F85 164 aaPredicted RBP12.87□□□□□ -0.35
CCDC50-201ENST00000392455 C21orf140B9A014 251 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 STARD6P59095 220 aa12.87□□□□□ -0.35
CCDC50-201ENST00000392455 MRPL18Q9H0U6 180 aaKnown RBP12.87□□□□□ -0.35
CCDC50-201ENST00000392455 SPTY2D1-AS1A0A0U1RR47 76 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 RIMKLAQ8IXN7 391 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 RNF182Q8N6D2 247 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 ANK1P16157 1881 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 ZNF98A6NK75 572 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 HBBP68871 147 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 EWSR1Q01844 656 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC50-201ENST00000392455 GCSAMQ8N6F7 178 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 DEFB124Q8NES8 71 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 SLIRPQ9GZT3 109 aaKnown RBP12.86□□□□□ -0.35
CCDC50-201ENST00000392455 GDF9O60383 454 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 FCGR2BP31994 310 aaPredicted RBP12.86□□□□□ -0.35
CCDC50-201ENST00000392455 PF4V1P10720 104 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 ZNF774Q6NX45 483 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 SDHCQ99643 169 aaPredicted RBP12.86□□□□□ -0.35
CCDC50-201ENST00000392455 NPFFR1Q9GZQ6 430 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 CYSLTR1Q9Y271 337 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 A0A1B0GV90 55 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 ODAMA1E959 279 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 SPINK9Q5DT21 86 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 KCNE3Q9Y6H6 103 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 MEX3AA1L020 520 aaKnown RBP12.86□□□□□ -0.35
CCDC50-201ENST00000392455 RPL31P62899 125 aaKnown RBP12.86□□□□□ -0.35
CCDC50-201ENST00000392455 C9orf50Q5SZB4 431 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 TRAF4Q9BUZ4 470 aaPredicted RBP12.86□□□□□ -0.35
CCDC50-201ENST00000392455 ZNF430Q9H8G1 570 aaPredicted RBP12.86□□□□□ -0.35
CCDC50-201ENST00000392455 BEX4Q9NWD9 120 aaPredicted RBP12.86□□□□□ -0.35
CCDC50-201ENST00000392455 PATJQ8NI35 1801 aa12.86□□□□□ -0.35
CCDC50-201ENST00000392455 SDK2Q58EX2 2172 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 C7orf71A4D174 169 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 LEUTXA8MZ59 168 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 ACSF3Q4G176 576 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms