RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 IFI27L2Q9H2X8 130 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 GAB2Q9UQC2 676 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 ABCA4P78363 2273 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 USF3Q68DE3 2245 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 PITX3O75364 302 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 SPDEFO95238 335 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 CLDN1O95832 211 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 IGFBP2P18065 325 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 ZNF134P52741 427 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 BPIFB3P59826 476 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 RPL31P62899 125 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 Q3ZCU0 254 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 CLLU1Q5K131 121 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 BTNL3Q6UXE8 466 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 DTX2Q86UW9 622 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 SCARB1Q8WTV0 552 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 GPR146Q96CH1 333 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 ZNF471Q9BX82 626 aaPredicted RBP9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 GSX2Q9BZM3 304 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 GAL3ST2Q9H3Q3 398 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 C19orf12Q9NSK7 152 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 CTSZQ9UBR2 303 aa9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 RCL1Q9Y2P8 373 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-203ENST00000392128 SPTBN1Q01082 2364 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 COL12A1Q99715 3063 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 A0A0G2JRQ6 117 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 RPS10-NUDT3A0A1W2PQS6 291 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 F5H0A9 414 aaPredicted RBP9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 DANCRP0C864 163 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 COL8A2P25067 703 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 RPL12P30050 165 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 ID3Q02535 119 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 DMBX1Q8NFW5 382 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 STOML3Q8TAV4 291 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 TCTEX1D2Q8WW35 142 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 ABHD14AQ9BUJ0 271 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 C11orf1Q9H5F2 150 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 IGSF10Q6WRI0 2623 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 USP24Q9UPU5 2620 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 DVL1O14640 695 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 IGKV1-5P01602 117 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 SOD3P08294 240 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 LPAR6P43657 344 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 P2RY1P47900 373 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 MRPS11P82912 194 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 ZNF273Q14593 569 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 ZNF439Q8NDP4 499 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 RNASE11Q8TAA1 199 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 PHYHIPLQ96FC7 376 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 CYTL1Q9NRR1 136 aa9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 RPUSD1Q9UJJ7 312 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-203ENST00000392128 LINC00473A8K010 186 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 C19orf84I3L1E1 186 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 TAAR5O14804 337 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 RAMP3O60896 148 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 PROP1O75360 226 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 IGHV2-70P01814 119 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 DUTP33316 252 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 AKR1C2P52895 323 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 BRWD1-AS2P59051 145 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 RAB14P61106 215 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 CT45A1Q5HYN5 189 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 GPR157Q5UAW9 335 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 TMEM200BQ69YZ2 307 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 ALKAL2Q6UX46 152 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 SPAG16Q8N0X2 631 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 CT45A3Q8NHU0 189 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 NEU4Q8WWR8 484 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 ZNF714Q96N38 554 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 YLPM1P49750 1951 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 C17orf98A8MV24 154 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 LYNX1G3V0Z9 82 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 SHOXO15266 292 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 SLC31A2O15432 143 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 ATG12O94817 140 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 LYNX1P0DP58 116 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 MMP9P14780 707 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 ARHGDIBP52566 201 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 CXorf66Q5JRM2 361 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 UTF1Q5T230 341 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 HEPN1Q6WQI6 88 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 CD300LFQ8TDQ1 290 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 PPP1R14DQ9NXH3 145 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 COA4Q9NYJ1 87 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 LAMP3Q9UQV4 416 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 MMP24Q9Y5R2 645 aa9.43□□□□□ -0.9
SMARCAL1-203ENST00000392128 A0A1W2PPR1 153 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 GPR137BO60478 399 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 MMP23AO75900 390 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 PVALBP20472 110 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 EPHA1P21709 976 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 NFYBP25208 207 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 PRAMEF5Q5TYX0 476 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 Q6ZRM9 215 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 H1FXQ92522 213 aaKnown RBP9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 LEAP2Q969E1 77 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 ZC4H2Q9NQZ6 224 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 CACNG5Q9UF02 275 aa9.42□□□□□ -0.9
SMARCAL1-203ENST00000392128 LINC00862A6NCI5 91 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms