RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 RNF5Q99942 180 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 RARRES2Q99969 163 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 HSPB9Q9BQS6 159 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 EFCAB11Q9BUY7 163 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 C1orf50Q9BV19 199 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 EBPLQ9BY08 206 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 TBL1XR1Q9BZK7 514 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 SH3BGRL3Q9H299 93 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 NIT2Q9NQR4 276 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 CISHQ9NSE2 258 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 MED29Q9NX70 200 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 MRPL27Q9P0M9 148 aaKnown RBP1.29□□□□□ -2.2
TRAV40-201ENST00000390467 COPZ2Q9P299 210 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 VAX2Q9UIW0 290 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 ANXA10Q9UJ72 324 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 PRNDQ9UKY0 176 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 RAB22AQ9UL26 194 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 PYCARDQ9ULZ3 195 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF780BQ9Y6R6 833 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 FAM135BQ49AJ0 1406 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 SMG6Q86US8 1419 aaKnown RBP1.29□□□□□ -2.2
TRAV40-201ENST00000390467 VPS8Q8N3P4 1428 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 WDR62O43379 1518 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 GPATCH8Q9UKJ3 1502 aaKnown RBP1.29□□□□□ -2.2
TRAV40-201ENST00000390467 FBN3Q75N90 2809 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 CACNA1SQ13698 1873 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 TMEM131Q92545 1883 aa1.29□□□□□ -2.2
TRAV40-201ENST00000390467 BAZ2AQ9UIF9 1905 aaKnown RBP1.28□□□□□ -2.2
TRAV40-201ENST00000390467 MEIKINA0A087WXM9 373 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 TRAV8-4A0A0B4J246 113 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 CIB4A0PJX0 185 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF726A6NNF4 738 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF850A8MQ14 1090 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 EEF1E1-BLOC1S5C9J1V9 151 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 LINC01619G3V211 115 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 H7C1H1 209 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 TP53I11O14683 189 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 HMGB3O15347 200 aaKnown RBP1.28□□□□□ -2.2
TRAV40-201ENST00000390467 EEF1E1O43324 174 aaKnown RBP1.28□□□□□ -2.2
TRAV40-201ENST00000390467 TCF21O43680 179 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 YIF1AO95070 293 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 GADD45GO95257 159 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 P01737 135 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 IGKV5-2P06315 115 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 C8GP07360 202 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 TSPAN19P0C672 248 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 P0C880 135 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 CD79AP11912 226 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 CXCL3P19876 107 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 SLC2A5P22732 501 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 CDK2P24941 298 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 MIPP30301 263 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 S100A11P31949 105 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 EVX1P49640 407 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 RND2P52198 227 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 PIGPP57054 158 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 SLC35A2P78381 396 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 HPCAP84074 193 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 EMX1Q04741 257 aaPredicted RBP1.28□□□□□ -2.2
TRAV40-201ENST00000390467 MXD1Q05195 221 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 PRDX1Q06830 199 aaKnown RBP1.28□□□□□ -2.2
TRAV40-201ENST00000390467 PMAIP1Q13794 54 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 QPRTQ15274 297 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 IAH1Q2TAA2 248 aaPredicted RBP1.28□□□□□ -2.2
TRAV40-201ENST00000390467 CDNFQ49AH0 187 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 AKR1C8PQ5T2L2 129 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 C1orf194Q5T5A4 169 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 SPATA31B1PQ5VZV4 182 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 ZFAND6Q6FIF0 208 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 AGTRAPQ6RW13 159 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 PLET1Q6UQ28 207 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 SCIMPQ6UWF3 145 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF550Q7Z398 422 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 OAFQ86UD1 273 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF283Q8N7M2 679 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 ZFP41Q8N8Y5 198 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 CHST4Q8NCG5 386 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 OR11H6Q8NGC7 330 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 OR52L1Q8NGH7 329 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 OR52E2Q8NGJ4 325 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 OR51A2Q8NGJ7 313 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 OR9I1Q8NGQ6 314 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 OR10D3Q8NH80 312 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 GPR119Q8TDV5 335 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 TMEM230Q96A57 120 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 PTX4Q96A99 478 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 BORCS7Q96B45 105 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 TM4SF18Q96CE8 201 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 PIK3IP1Q96FE7 263 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 DCUN1D1Q96GG9 259 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 FMC1Q96HJ9 113 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 NARS2Q96I59 477 aaKnown RBP1.28□□□□□ -2.2
TRAV40-201ENST00000390467 CCDC115Q96NT0 180 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 GPER1Q99527 375 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 FAAP24Q9BTP7 215 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 GABARAPL3Q9BY60 117 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 MROQ9BYG7 248 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 TMEM126AQ9H061 195 aa1.28□□□□□ -2.2
TRAV40-201ENST00000390467 RNASE7Q9H1E1 156 aaKnown RBP1.28□□□□□ -2.2
TRAV40-201ENST00000390467 OR51E2Q9H255 320 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms