RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 OR10V1Q8NGI7 309 aa12.46□□□□□ -0.41
VPS9D1-201ENST00000389386 PSMF1Q92530 271 aa12.46□□□□□ -0.41
VPS9D1-201ENST00000389386 ZNF442Q9H7R0 627 aa12.46□□□□□ -0.41
VPS9D1-201ENST00000389386 CACNA1HO95180 2353 aa12.46□□□□□ -0.42
VPS9D1-201ENST00000389386 VSTM2BA6NLU5 285 aa12.46□□□□□ -0.42
VPS9D1-201ENST00000389386 TMPRSS2O15393 492 aa12.46□□□□□ -0.42
VPS9D1-201ENST00000389386 PGLYRP1O75594 196 aaPredicted RBP12.46□□□□□ -0.42
VPS9D1-201ENST00000389386 C1QTNF9P0C862 333 aa12.46□□□□□ -0.42
VPS9D1-201ENST00000389386 ZNF468Q5VIY5 522 aaPredicted RBP12.46□□□□□ -0.42
VPS9D1-201ENST00000389386 BAGE3Q86Y29 109 aa12.46□□□□□ -0.42
VPS9D1-201ENST00000389386 BAGE2Q86Y30 109 aa12.46□□□□□ -0.42
VPS9D1-201ENST00000389386 PLXDC1Q8IUK5 500 aa12.46□□□□□ -0.42
VPS9D1-201ENST00000389386 C1orf210Q8IVY1 113 aa12.46□□□□□ -0.42
VPS9D1-201ENST00000389386 TMEM105Q8N8V8 129 aa12.46□□□□□ -0.42
VPS9D1-201ENST00000389386 HSPB7Q9UBY9 170 aa12.46□□□□□ -0.42
VPS9D1-201ENST00000389386 TIMM9Q9Y5J7 89 aa12.46□□□□□ -0.42
VPS9D1-201ENST00000389386 TIAF1O95411 115 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 NRASP01111 189 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 KRASP01116 189 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 CBLN1P23435 193 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 LYSMD4Q5XG99 296 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 ZNF441Q8N8Z8 693 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 OR4C5Q8NGB2 326 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 STARD4Q96DR4 205 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 UBE2L5PA0A1B0GUS4 154 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 PATE3B3GLJ2 98 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 M0QZ24 198 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 SH2D1BO14796 132 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 TUSC2O75896 110 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 GPX1P07203 203 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 OTX1P32242 354 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 Q0VG73 95 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 DAZAP2Q15038 168 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 SNAI3Q3KNW1 292 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 SIGLECL1Q8N7X8 197 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 GJC3Q8NFK1 279 aa12.45□□□□□ -0.42
VPS9D1-201ENST00000389386 RALGAPA1Q6GYQ0 2036 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 GDF9O60383 454 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 HINT1P49773 126 aaPredicted RBP12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 Q6ZS49 121 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 VPS25Q9BRG1 176 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 MRPL18Q9H0U6 180 aaKnown RBP12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 CSTL1Q9H114 145 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 ZNF586Q9NXT0 402 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 C11orf94C9JXX5 98 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 SCTP09683 121 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 GLB1P16278 677 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 EGR1P18146 543 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 F2RP25116 425 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 ZNF114Q8NC26 417 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 OR5P3Q8WZ94 311 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 ZNF501Q96CX3 271 aaPredicted RBP12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 NUDT11Q96G61 164 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 SFRP2Q96HF1 295 aa12.44□□□□□ -0.42
VPS9D1-201ENST00000389386 TRAV34A0A0B4J273 112 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 A0A1W2PR80 420 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 M0R135 149 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 RBFOX2O43251 390 aaKnown RBP eCLIP12.43□□□□□ -0.421e-6■■■□□ 16.8
VPS9D1-201ENST00000389386 NAPSAO96009 420 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 CFIP05156 583 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 GNB1P62873 340 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 PLPPR5Q32ZL2 321 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 GUSBP11Q6P575 273 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 OR10G9Q8NGN4 311 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 OR10G7Q8NGN6 311 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 BORCS8Q96FH0 119 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 ZNF799Q96GE5 643 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 FAM103A1Q9BTL3 118 aaKnown RBP12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 BET1LQ9NYM9 111 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 IL36GQ9NZH8 169 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 CACNG5Q9UF02 275 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 MRPS16Q9Y3D3 137 aaKnown RBP12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 M0R296 226 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 BMP5P22003 454 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 BMI1P35226 326 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 RBM11P57052 281 aaKnown RBP12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 SLC38A11Q08AI6 406 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 C17orf67Q0P5P2 114 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 CNN3Q15417 329 aaKnown RBP12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 OR2AE1Q8NHA4 323 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 CLUHP3Q96NS8 147 aa12.43□□□□□ -0.42
VPS9D1-201ENST00000389386 A0A1B0GX78 115 aa12.42□□□□□ -0.42
VPS9D1-201ENST00000389386 MSR1P21757 451 aa12.42□□□□□ -0.42
VPS9D1-201ENST00000389386 TSPOP30536 169 aa12.42□□□□□ -0.42
VPS9D1-201ENST00000389386 PMS2CLQ68D20 193 aa12.42□□□□□ -0.42
VPS9D1-201ENST00000389386 LHFPL2Q6ZUX7 228 aa12.42□□□□□ -0.42
VPS9D1-201ENST00000389386 OR6C1Q96RD1 312 aa12.42□□□□□ -0.42
VPS9D1-201ENST00000389386 COPS7AQ9UBW8 275 aa12.42□□□□□ -0.42
VPS9D1-201ENST00000389386 PGPEP1LA6NFU8 196 aa12.42□□□□□ -0.42
VPS9D1-201ENST00000389386 OR7C1O76099 320 aaPredicted RBP12.42□□□□□ -0.42
VPS9D1-201ENST00000389386 SERPINE2P07093 398 aa12.42□□□□□ -0.42
VPS9D1-201ENST00000389386 SPANXN5Q5MJ07 72 aa12.42□□□□□ -0.42
VPS9D1-201ENST00000389386 MCEMP1Q8IX19 187 aa12.42□□□□□ -0.42
VPS9D1-201ENST00000389386 SAXO1Q8IYX7 474 aa12.42□□□□□ -0.42
VPS9D1-201ENST00000389386 DERL1Q9BUN8 251 aa12.42□□□□□ -0.42
VPS9D1-201ENST00000389386 NDUFB4O95168 129 aa12.41□□□□□ -0.42
VPS9D1-201ENST00000389386 PSG2P11465 335 aa12.41□□□□□ -0.42
VPS9D1-201ENST00000389386 PRSS12P56730 875 aa12.41□□□□□ -0.42
VPS9D1-201ENST00000389386 PSG4Q00888 419 aa12.41□□□□□ -0.42
VPS9D1-201ENST00000389386 LOXL4Q96JB6 756 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms