RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 GNLYP22749 145 aa8.4□□□□□ -1.06
LTN1-203ENST00000389195 UCNP55089 124 aa8.4□□□□□ -1.06
LTN1-203ENST00000389195 LOXL3P58215 753 aa8.4□□□□□ -1.06
LTN1-203ENST00000389195 MORN2Q502X0 79 aa8.4□□□□□ -1.06
LTN1-203ENST00000389195 LRTM2Q8N967 370 aa8.4□□□□□ -1.06
LTN1-203ENST00000389195 SLC25A32Q9H2D1 315 aa8.4□□□□□ -1.06
LTN1-203ENST00000389195 TANC2Q9HCD6 1990 aa8.4□□□□□ -1.07
LTN1-203ENST00000389195 TRAV3A0A0B4J244 114 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 METTL15P1P0C7V9 234 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 VDAC1P21796 283 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 PAX9P55771 341 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 P2RX3P56373 397 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 SRSF7Q16629 238 aaKnown RBP eCLIP8.39□□□□□ -1.07
LTN1-203ENST00000389195 NCMAPQ5T1S8 102 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 STUMQ69YW2 141 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 THOC7Q6I9Y2 204 aaKnown RBP8.39□□□□□ -1.07
LTN1-203ENST00000389195 NUP37Q8NFH4 326 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 TAS2R3Q9NYW6 316 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 CALYQ9NYX4 217 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 CLN8Q9UBY8 286 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 TET2Q6N021 2002 aaPredicted RBP8.39□□□□□ -1.07
LTN1-203ENST00000389195 M0R1X1 148 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 MGST3O14880 152 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 SPINT2O43291 252 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 IRF2P14316 349 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 RPS23P62266 143 aaKnown RBP8.39□□□□□ -1.07
LTN1-203ENST00000389195 UBA52P62987 128 aaKnown RBP8.39□□□□□ -1.07
LTN1-203ENST00000389195 EWSR1Q01844 656 aaKnown RBP eCLIP8.39□□□□□ -1.07
LTN1-203ENST00000389195 ARL16Q0P5N6 197 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 CT45A1Q5HYN5 189 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 OR5D13Q8NGL4 314 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 OR5C1Q8NGR4 320 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 CT45A3Q8NHU0 189 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 SNX22Q96L94 193 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 FAM210AQ96ND0 272 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 BARX1Q9HBU1 254 aaPredicted RBP8.39□□□□□ -1.07
LTN1-203ENST00000389195 KCNJ16Q9NPI9 418 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 CTSZQ9UBR2 303 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 USP9YO00507 2555 aaPredicted RBP8.39□□□□□ -1.07
LTN1-203ENST00000389195 FBN2P35556 2912 aa8.39□□□□□ -1.07
LTN1-203ENST00000389195 IFNL4K9M1U5 179 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 CD3EP07766 207 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 ACAA1P09110 424 aaPredicted RBP8.38□□□□□ -1.07
LTN1-203ENST00000389195 FAM157CP0CG43 387 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 LYL1P12980 280 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 TNFSF4P23510 183 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 DYNLT3P51808 116 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 LYG1Q8N1E2 194 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 OR2C3Q8N628 320 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 ZNF645Q8N7E2 425 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 MFSD2BA6NFX1 497 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 E5RGE8 158 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 C19orf84I3L1E1 186 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 TPT1P13693 172 aaKnown RBP8.38□□□□□ -1.07
LTN1-203ENST00000389195 CHRNB4P30926 498 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 GPR12P47775 334 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 SPANXN5Q5MJ07 72 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 SHEQ5VZ18 495 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 MOB1BQ7L9L4 216 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 MUC15Q8N387 334 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 TMEM252Q8N6L7 170 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 ST6GALNAC3Q8NDV1 305 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 Q8TCH9 128 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 RNF115Q9Y4L5 304 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 POMT1Q9Y6A1 747 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 CHD6Q8TD26 2715 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 NAV3Q8IVL0 2385 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 MED6O75586 246 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 SOD3P08294 240 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 PET100P0DJ07 73 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 DEFA4P12838 97 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 RND3P61587 244 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 OR8G2PQ6IF36 304 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 ATRAIDQ6UW56 229 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 ASB13Q8WXK3 278 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 POM121Q96HA1 1249 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 PLEKHF2Q9H8W4 249 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 TMEM106BQ9NUM4 274 aa8.38□□□□□ -1.07
LTN1-203ENST00000389195 SLC25A10Q9UBX3 287 aaPredicted RBP8.38□□□□□ -1.07
LTN1-203ENST00000389195 TMEM178BH3BS89 294 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 TUBG1P23258 451 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 GATA4P43694 442 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 VAMP2P63027 116 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 ID3Q02535 119 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 ZNF788Q6ZQV5 615 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 FAM185AQ8N0U4 392 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 PRORYQ9H606 182 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 RHOFQ9HBH0 211 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 TUBG2Q9NRH3 451 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 NDRG3Q9UGV2 375 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 LAMP3Q9UQV4 416 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 SAA2-SAA4A0A096LPE2 208 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 SAA2P0DJI9 122 aaPredicted RBP8.37□□□□□ -1.07
LTN1-203ENST00000389195 RPL31P62899 125 aaKnown RBP8.37□□□□□ -1.07
LTN1-203ENST00000389195 TMEM182Q6ZP80 229 aaPredicted RBP8.37□□□□□ -1.07
LTN1-203ENST00000389195 LURAP1Q96LR2 239 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 IFI27L2Q9H2X8 130 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 ZNF665Q9H7R5 613 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 AUP1Q9Y679 476 aa8.37□□□□□ -1.07
LTN1-203ENST00000389195 PPIAL4EA0A075B759 164 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms