RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 NKX6-2Q9C056 277 aaPredicted RBP2.53□□□□□ -2
RNU6-40P-201ENST00000384254 DERL2Q9GZP9 239 aa2.53□□□□□ -2
RNU6-40P-201ENST00000384254 HES4Q9HCC6 221 aa2.53□□□□□ -2
RNU6-40P-201ENST00000384254 EMC3Q9P0I2 261 aa2.53□□□□□ -2
RNU6-40P-201ENST00000384254 TRPM3Q9HCF6 1732 aaPredicted RBP2.53□□□□□ -2
RNU6-40P-201ENST00000384254 DOCK6Q96HP0 2047 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 CACNA1SQ13698 1873 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 KMT2EQ8IZD2 1858 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 BRD4O60885 1362 aaPredicted RBP2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 COL5A1P20908 1838 aaPredicted RBP2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 C3orf84H3BNL1 204 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 UBFD1O14562 309 aaKnown RBP2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 UBE2L6O14933 153 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 TYMSP04818 313 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 IL6P05231 212 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 KRT7P08729 469 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 CXCL2P19875 107 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 CXCL3P19876 107 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 OR10J1P30954 320 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 SLC51BQ86UW2 128 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 OR4C16Q8NGL9 310 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 FNDC9Q8TBE3 224 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 UPK3BQ9BT76 320 aa2.52□□□□□ -2.01
RNU6-40P-201ENST00000384254 DSCAML1Q8TD84 2053 aa2.51□□□□□ -2.01
RNU6-40P-201ENST00000384254 NPPCP23582 126 aa2.51□□□□□ -2.01
RNU6-40P-201ENST00000384254 DDTP30046 118 aa2.51□□□□□ -2.01
RNU6-40P-201ENST00000384254 TMEM33P57088 247 aa2.51□□□□□ -2.01
RNU6-40P-201ENST00000384254 KRTAP10-1P60331 282 aa2.51□□□□□ -2.01
RNU6-40P-201ENST00000384254 FAM229BQ4G0N7 80 aa2.51□□□□□ -2.01
RNU6-40P-201ENST00000384254 AMTNQ6UX39 209 aa2.51□□□□□ -2.01
RNU6-40P-201ENST00000384254 NAA40Q86UY6 237 aa2.51□□□□□ -2.01
RNU6-40P-201ENST00000384254 BAP18Q8IXM2 172 aa2.51□□□□□ -2.01
RNU6-40P-201ENST00000384254 C16orf78Q8WTQ4 265 aa2.51□□□□□ -2.01
RNU6-40P-201ENST00000384254 STACQ99469 402 aa2.51□□□□□ -2.01
RNU6-40P-201ENST00000384254 PCYT1BQ9Y5K3 369 aaPredicted RBP2.51□□□□□ -2.01
RNU6-40P-201ENST00000384254 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 A0A0J9YX75 114 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 VPS37CA5D8V6 355 aaPredicted RBP2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 M0QZ92 97 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 SLC17A3O00476 420 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 TRAPPC3O43617 180 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 MT-CO2P00403 227 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 SOD1P00441 154 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 COX5BP10606 129 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 CD36P16671 472 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 FUSP35637 526 aaKnown RBP eCLIP2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 DAPP51397 102 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 SNAP25P60880 206 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 CXCR4P61073 352 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 HLA-DRB3P79483 266 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 PPP1R1AQ13522 171 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 PIGXQ8TBF5 258 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 CPNE2Q96FN4 548 aaPredicted RBP2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 ARL5BQ96KC2 179 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 TMEM109Q9BVC6 243 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 MAP1LC3AQ9H492 121 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 C11orf1Q9H5F2 150 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 SLC2A9Q9NRM0 540 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 POLR3HQ9Y535 204 aaPredicted RBP2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 COL18A1P39060 1754 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 OTOFQ9HC10 1997 aa2.5□□□□□ -2.01
RNU6-40P-201ENST00000384254 SHANK3Q9BYB0 1731 aa2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 C17orf51A8MQB3 221 aa2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 LRRN3E7EW58 273 aa2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 H0Y980 276 aa2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 C8orf88P0DMB2 117 aa2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 ZNF7P17097 686 aaPredicted RBP2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 CRHBPP24387 322 aa2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 BLVRBP30043 206 aaPredicted RBP2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 CDK9P50750 372 aaKnown RBP2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 HOXC5Q00444 222 aa2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 MLLT11Q13015 90 aaPredicted RBP2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 TMEM31Q5JXX7 168 aa2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 ZNF567Q8N184 647 aa2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.49□□□□□ -2.012e-9■■■■■ 30.4
RNU6-40P-201ENST00000384254 C12orf43Q96C57 262 aaKnown RBP2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 ANKRD36BP1Q96IX9 119 aa2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 PSORS1C2Q9UIG4 136 aa2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 POLR1DQ9Y2S0 133 aa2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 NOSIPQ9Y314 301 aaKnown RBP2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 MINOS1-NBL1R4GNA1 71 aa2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 ABCC11Q96J66 1382 aa2.49□□□□□ -2.01
RNU6-40P-201ENST00000384254 H3BPC8 53 aa2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 M0R381 172 aa2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 IL3P08700 152 aa2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 GZMBP10144 247 aa2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 RPS24P62847 133 aaKnown RBP2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 GNA12Q03113 381 aa2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 JOSD1Q15040 202 aaPredicted RBP2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 ZNF181Q2M3W8 571 aa2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 RASSF6Q6ZTQ3 369 aa2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 ZNF767PQ75MW2 155 aa2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 LRRC34Q8IZ02 419 aa2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 TMEM156Q8N614 296 aa2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 JOSD2Q8TAC2 188 aa2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 FKBP14Q9NWM8 211 aa2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 MMACHCQ9Y4U1 282 aa2.48□□□□□ -2.01
RNU6-40P-201ENST00000384254 TRGV4A0A0C4DH28 118 aa2.47□□□□□ -2.01
RNU6-40P-201ENST00000384254 C19orf71A6NCJ1 209 aa2.47□□□□□ -2.01
RNU6-40P-201ENST00000384254 CSRP1P21291 193 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms