RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 OR2W1Q9Y3N9 320 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 KIR2DS1A0A191URI9 304 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 hCG_38984A0A1B0GV85 526 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 KIR2DS4P43632 304 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 KIR2DS1Q14954 304 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 TMEM14EPQ6UXP3 125 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 OR1L1Q8NH94 360 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 F6UZH7 168 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 TOMM40O96008 361 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 GPX1P07203 203 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 COX5AP20674 150 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 ZNF90Q03938 601 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 FAM27BQ5VT28 67 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 KMT5CQ86Y97 462 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 TMEM204Q9BSN7 226 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 LRFN3Q9BTN0 628 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 TBL2Q9Y4P3 447 aaKnown RBP12.67□□□□□ -0.38
CTNS-202ENST00000381870 COX11Q9Y6N1 276 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 MUC3AQ02505 3323 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 NPIPA2E9PIF3 369 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 C3orf80F5H4A9 247 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 NPIPA3F8WFD2 350 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 SLC17A3O00476 420 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 IGLV2-14P01704 120 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 ARL4DP49703 201 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 SRSF7Q16629 238 aaKnown RBP eCLIP12.67□□□□□ -0.38
CTNS-202ENST00000381870 ZNF585BQ52M93 769 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 KRTCAP3Q53RY4 240 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 NFAM1Q8NET5 270 aaPredicted RBP12.67□□□□□ -0.38
CTNS-202ENST00000381870 RNF138Q8WVD3 245 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 CLDN23Q96B33 292 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 IGFLR1Q9H665 355 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 ZNF586Q9NXT0 402 aa12.67□□□□□ -0.38
CTNS-202ENST00000381870 FCN1O00602 326 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 CTXN2P0C2S0 81 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 HLA-BQ31612 363 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 GCSAMLQ5JQS6 135 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 MCEMP1Q8IX19 187 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 SAXO1Q8IYX7 474 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 IL1F10Q8WWZ1 152 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 RDH5Q92781 318 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 STRADBQ9C0K7 418 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 OR1A1Q9P1Q5 309 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 LILRA5A6NI73 299 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 M0QZ24 198 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 ZNHIT1O43257 154 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 PDE6DO43924 150 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 IER3P46695 156 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 CARD18P57730 90 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 TRIM61Q5EBN2 209 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 TDHQ8IZJ6 230 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 LMX1AQ8TE12 382 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 NPCDR1Q9BY65 106 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 WNT10AQ9GZT5 417 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 GNB4Q9HAV0 340 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 NRN1Q9NPD7 142 aa12.66□□□□□ -0.38
CTNS-202ENST00000381870 IGHEP01854 428 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 ZNF32P17041 273 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 GABRG2P18507 467 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 TIMP3P35625 211 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 CDC34P49427 236 aaPredicted RBP12.65□□□□□ -0.38
CTNS-202ENST00000381870 HLA-DRB5Q30154 266 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 PRAMEF20Q5VT98 475 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 OR10G8Q8NGN5 311 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 KLHDC7BQ96G42 594 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 TMEM147Q9BVK8 224 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 CFAP54Q96N23 3096 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 IGLV3-32A0A0A0MS00 114 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 TRAV38-1A0A0B4J264 116 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 A0A1B0GX78 115 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 SPINK2P20155 84 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 CLDN15P56746 228 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 Q0VG73 95 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 MAJINQ3KP22 176 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 ANKRD37Q7Z713 158 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 ATOH7Q8N100 152 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 ZNF738Q8NE65 137 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 OCC1Q8TAD7 63 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 CLN8Q9UBY8 286 aa12.65□□□□□ -0.38
CTNS-202ENST00000381870 SNURFLB1AK76 121 aa12.64□□□□□ -0.39
CTNS-202ENST00000381870 TNFSF11O14788 317 aa12.64□□□□□ -0.39
CTNS-202ENST00000381870 B4GALT1P15291 398 aa12.64□□□□□ -0.39
CTNS-202ENST00000381870 PMCHP20382 165 aa12.64□□□□□ -0.39
CTNS-202ENST00000381870 FBLN7Q53RD9 439 aa12.64□□□□□ -0.39
CTNS-202ENST00000381870 ZIC4Q8N9L1 334 aa12.64□□□□□ -0.39
CTNS-202ENST00000381870 APOBEC3DQ96AK3 386 aaPredicted RBP12.64□□□□□ -0.39
CTNS-202ENST00000381870 FGF23Q9GZV9 251 aaPredicted RBP12.64□□□□□ -0.39
CTNS-202ENST00000381870 GSX1Q9H4S2 264 aaPredicted RBP12.64□□□□□ -0.39
CTNS-202ENST00000381870 CRIM1Q9NZV1 1036 aa12.64□□□□□ -0.39
CTNS-202ENST00000381870 DIDO1Q9BTC0 2240 aaKnown RBP12.64□□□□□ -0.39
CTNS-202ENST00000381870 UNC13CQ8NB66 2214 aa12.64□□□□□ -0.39
CTNS-202ENST00000381870 ASXL3Q9C0F0 2248 aa12.64□□□□□ -0.39
CTNS-202ENST00000381870 AMTP48728 403 aa12.64□□□□□ -0.39
CTNS-202ENST00000381870 OR4C5Q8NGB2 326 aa12.64□□□□□ -0.39
CTNS-202ENST00000381870 FGFBP3Q8TAT2 258 aa12.64□□□□□ -0.39
CTNS-202ENST00000381870 RCHY1Q96PM5 261 aa12.64□□□□□ -0.39
CTNS-202ENST00000381870 RNF24Q9Y225 148 aa12.64□□□□□ -0.39
CTNS-202ENST00000381870 FAM90A10PA6NDY2 464 aa12.63□□□□□ -0.39
CTNS-202ENST00000381870 FAM90A18PA6NE21 464 aa12.63□□□□□ -0.39
CTNS-202ENST00000381870 FAM90A16PA6NEW6 464 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms